| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3428 |
|---|
| Symbol | |
|---|
| ID | 6271060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 3189974 |
|---|
| End bp | 3190411 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641727315 |
|---|
| Product | carboxymethylenebutenolidase |
|---|
| Protein accession | YP_001881764 |
|---|
| Protein GI | 187731686 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGTT TAACCGCCAA AGATTTCCCA CAAGAGTTGT TGGATTACTA CGACTATTAC
GCTCACGGGA AAATTTCGAA ACGTGAGTTC CTCAACCTTG CGGCGAAGTA TGCGGTGGGC
GGGATGACGG CATTAGCGTT GTTTGATTTG CTCAAGCCAA ATTATGCGCT GACGACTCAG
GTAGAGTTTA CCGACCCGGA GATTGTTGCT GAGTACATCA CGTATCCTTC GCCAAATGGT
CACGGCGAGG TACGGGGTTA TCTGGTGAAA CCCGCAAAAA TGAGCGGCAA AACGCCAGCC
GTGGTGGTGG TGCATGAGAA TCGTGGACTG AATCCGTATA TCGAAGATGT GGCACGGCGA
GTGACGAAGG CGGGGTATAT CGCCCTGGCA CCTGACGGCT TAAGTTCCGT TGGAGGGGTA
ATGCTGCCAA CTTACTGA
|
|---|
| Protein sequence | MPRLTAKDFP QELLDYYDYY AHGKISKREF LNLAAKYAVG GMTALALFDL LKPNYALTTQ
VEFTDPEIVA EYITYPSPNG HGEVRGYLVK PAKMSGKTPA VVVVHENRGL NPYIEDVARR
VTKAGYIALA PDGLSSVGGV MLPTY
|
|---|
| |