| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3418 |
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| Symbol | hypA1 |
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| ID | 6272793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 3181868 |
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| End bp | 3182209 |
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| Gene Length | 342 bp |
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| Protein Length | 113 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 641727305 |
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| Product | hydrogenase nickel incorporation protein HybF |
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| Protein accession | YP_001881754 |
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| Protein GI | 187730554 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0375] Zn finger protein HypA/HybF (possibly regulating hydrogenase expression) |
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| TIGRFAM ID | [TIGR00100] hydrogenase nickel insertion protein HypA |
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Plasmid Coverage information |
| Num covering plasmid clones | 57 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATGAGT TGTCGCTTTG CCAGAGCGCC GTTGAAATTA TCCAACGGCA GGCGGAGCAG
CACGATGTTA AGCGCGTCAC CGCCGTGTGG CTGGAAATTG GCGCGCTCTC CTGCGTTGAG
GAGAGCGCCG TCCGTTTTAG TTTTGAAATT GTCTGCCACG GAACGGTGGC GCAAGGGTGC
GATTTACATA TCGTCTATAA ACCCGCCCAG GCCTGGTGCT GGGATTGCAG CCAGGTGGTG
GAGATTCATC AGCACGATGC GCAGTGTCCG CTCTGTCACG GCGAGCGGTT GCGTGTCGAT
ACCGGCGATT CGCTGATCGT CAAAAGTATT GAAGTTGAAT AA
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| Protein sequence | MHELSLCQSA VEIIQRQAEQ HDVKRVTAVW LEIGALSCVE ESAVRFSFEI VCHGTVAQGC
DLHIVYKPAQ AWCWDCSQVV EIHQHDAQCP LCHGERLRVD TGDSLIVKSI EVE
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