Gene SbBS512_E3409 details

Gene Information

• Locus tag: SbBS512_E3409
• Symbol: gspG
• ID: 6272373
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 3169546
• End bp: 3170001
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 641727298
• Product: general secretion pathway protein GspG
• Protein accession: YP_001881747
• Protein GI: 187732466
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01710] general secretion pathway protein G; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATTCGT TATCCCGCAC ACACAAACCA CGGGCAGGTT TTACCCTGCT GGAAGTGATG 
GTGGTGATTG TTATTCTTGG CGTCCTGGCA AGTCTGGTGG TGCCTAACCT GTTGGGCAAC 
AAAGAGAAAG CCGATCGGCA AAAAGCCATC AGCGATATCG TGGCGCTGGA AAACGCACTA 
GATATGTACC GACTGGATAA CGGGCGTTAT CCGACCACAG AACAGGGGCT GGAAGCGCTG 
ATCCAGCAGC CAGCCAATAT GGCGGACTCC CGCAACTACC GTACTGGTGG ATACATCAAA 
CGACTGCCAA AGGATCCGTG GGGCAATGAT TATCAGTATC TCAGCCCGGG TGAAAAAGGA 
CTGTTTGATG TTTATACCCT GGGGGCGGAT GGTCAGGAAA ACGGGGAAGG CGCTGGCGCA 
GATATCGGTA ACTGGAATTT GCAGGAGTTT CAGTAA 

 

Protein sequence

MNSLSRTHKP RAGFTLLEVM VVIVILGVLA SLVVPNLLGN KEKADRQKAI SDIVALENAL 
DMYRLDNGRY PTTEQGLEAL IQQPANMADS RNYRTGGYIK RLPKDPWGND YQYLSPGEKG 
LFDVYTLGAD GQENGEGAGA DIGNWNLQEF Q