| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3397 |
|---|
| Symbol | nupG |
|---|
| ID | 6269905 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 3158937 |
|---|
| End bp | 3160193 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641727288 |
|---|
| Product | nucleoside permease NupG |
|---|
| Protein accession | YP_001881738 |
|---|
| Protein GI | 187733605 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR00889] nucleoside transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCTTA AGCTGCAGCT GAAAATCCTC TCTTTTCTGC AGTTCTGTCT GTGGGGAAGT
TGGCTGACGA CCCTCGGCTC CTATATGTTT GTTACCCTGA AGTTTGACGG TGCTTCTATT
GGCGCAGTTT ATAGCTCACT GGGTATCGCA GCGGTCTTTA TGCCTGCGCT GCTGGGGATT
GTGGCCGACA AATGGTTAAG TGCGAAATGG GTATATGCCA TTTGCCACAC CATTGGCGCT
ATCACGCTGT TCATGGCGGC ACAGGTCACG ACACCGGAGG CGATGTTCCT TGTGATATTG
ATTAACTCGT TTGCTTATAT GCCAACGCTT GGGTTAATCA ACACCATCTC TTACTATCGC
CTGCAAAATG CCGGGATGGA TATCGTTACT GACTTCCCGC CAATCCGTAT CTGGGGCACC
ATCGGCTTTA TCATGGCAAT GTGGGTGGTG AGCCTGTCTG GCTTCGAATT AAGCCACATG
CAGCTGTATA TTGGCGCAGC ACTTTCCGCC ATTCTGGTTC TGTTTACCCT GACTCTGCCG
CATATTCCGG TTGCTAAACA GCAAGCGAAT CAGAGCTGGA CAACCCTGCT GGGCCTCGAT
GCATTCGCGC TGTTTAAAAA CAAGCGTATG GCAATCTTCT TTATCTTCTC AATGCTGCTG
GGCGCGGAAC TGCAGATTAC CAACATGTTC GGTAATACCT TCCTGCACAG CTTCGACAAA
GATCCGATGT TTGCCAGCAG CTTTATTGTG CAGCATGCGT CAATCATCAT GTCGATTTCG
CAGATCTCTG AAACCCTGTT CATTCTGACC ATCCCGTTCT TCTTAAGCCG CTACGGTATT
AAGAACGTAA TGATGATCAG TATTGTGGCG TGGATCCTGC GTTTTGCGCT GTTTGCTTAC
GGCGACCCGA CTCCGTTCGG TACTGTACTG CTGGTACTGT CGATGATCGT TTACGGTTGC
GCATTCGACT TCTTCAACAT CTCTGGTTCG GTGTTTGTCG AAAAAGAAGT TAGCCCGGCA
ATTCGCGCCA GTGCACAAGG GATGTTCCTG ATGATGACTA ACGGCTTCGG CTGTATCCTC
GGCGGCATCG TGAGCGGTAA AGTTGTTGAG ATGTACACCC AAAACGGCAT TACCGACTGG
CAGACCGTAT GGTTGATTTT CGCTGGTTAC TCCGTGGTTC TGGCCTTCGC GTTCATGGCG
ATGTTCAAAT ATAAACACGT TCGTGTCCCG ACAGGCACAC AGACGGTTAG CCACTAA
|
|---|
| Protein sequence | MNLKLQLKIL SFLQFCLWGS WLTTLGSYMF VTLKFDGASI GAVYSSLGIA AVFMPALLGI
VADKWLSAKW VYAICHTIGA ITLFMAAQVT TPEAMFLVIL INSFAYMPTL GLINTISYYR
LQNAGMDIVT DFPPIRIWGT IGFIMAMWVV SLSGFELSHM QLYIGAALSA ILVLFTLTLP
HIPVAKQQAN QSWTTLLGLD AFALFKNKRM AIFFIFSMLL GAELQITNMF GNTFLHSFDK
DPMFASSFIV QHASIIMSIS QISETLFILT IPFFLSRYGI KNVMMISIVA WILRFALFAY
GDPTPFGTVL LVLSMIVYGC AFDFFNISGS VFVEKEVSPA IRASAQGMFL MMTNGFGCIL
GGIVSGKVVE MYTQNGITDW QTVWLIFAGY SVVLAFAFMA MFKYKHVRVP TGTQTVSH
|
|---|
| |