Gene SbBS512_E3396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3396 
SymbolmltC 
ID6271041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3157656 
End bp3158735 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content51% 
IMG OID641727287 
Productmurein transglycosylase C 
Protein accessionYP_001881737 
Protein GI187734128 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT ATCTCGCGCT GGCTTTGATT GCGCCGTTGC TCATCTCCTG TTCGACGACC 
AAAAAAGGCG ATACCTATAA CGAAGCCTGG GTCAAAGATA CCAACGGTTT TGATATTCTG
ATGGGGCAAT TTGCCCACAA TATTGAGAAC ATCTGGGGAT TCAAAGAGGT GGTGATCGCC
GGTCCTAAGG ACTACGTGAA ATACACCGAT CAATATCAGA CCCGCAGCCA CATCAACTTC
GATGACGGTA CGATTACTAT CGAAACTATC GCCGGGACAG AACCTGCCGC GCATTTGCGC
CGGGCAATTA TCAAAACGTT GCTGATGGGT GACGATCCGA GTTCGGTCGA TCTCTATTCC
GACGTTGATG ATATTACGAT TTCGAAAGAA CCTTTCCTTT ACGGTCAGGT GGTGGACAAC
ACCGGGCAGC CGATTCGCTG GGAAGGTCGC GCAAGCAACT TCGCGGATTA TCTGCTGAAA
AACCGTCTGC AAAGCCGCAG TAACGGGCTG CGTATCATCT ACAGCGTCAC CATTAACATG
GTACCGAACC ACCTTGATAA ACGTGCGCAC AAATATCTCG GCATGGTCCG CCAGGCGTCA
CGGAAATATG GCGTTGATGA GTCGCTGATT CTGGCAATTA TGCAGACCGA ATCTTCCTTT
AACCCGTATG CGGTCAGCCG TTCCGATGCG CTGGGATTAA TGCAGGTGGT ACAACATACT
GCCGGGAAAG ATGTGTTCCG CTCGCAGGGG AAATCCGGCA CGCCGAGCCG CAGTTTCTTG
TTTGATCCTG CCAGCAATAT TGATACCGGC ACCGCGTATC TGGCGATGCT GAACAATGTT
TATCTCGGCG GAATTGATAA CCCAACATCG CGGCGTTATG CCGTCATCAC CGCCTATAAC
GGCGGCGCAG GCAGCGTGCT GCGAGTCTTT TCGAATGATA AGATTCAGGC TGCCAATATT
ATTAACACCA TGACGCCGGG CGATGTTTAT CAGACGCTGA CGACCCGCCA TCCCTCTGCG
GAATCTCGCC GTTATCTTTA TAAAGTGAAT ACCGCGCAAA AATCCTACCG CCGCCGATAA
 
Protein sequence
MKKYLALALI APLLISCSTT KKGDTYNEAW VKDTNGFDIL MGQFAHNIEN IWGFKEVVIA 
GPKDYVKYTD QYQTRSHINF DDGTITIETI AGTEPAAHLR RAIIKTLLMG DDPSSVDLYS
DVDDITISKE PFLYGQVVDN TGQPIRWEGR ASNFADYLLK NRLQSRSNGL RIIYSVTINM
VPNHLDKRAH KYLGMVRQAS RKYGVDESLI LAIMQTESSF NPYAVSRSDA LGLMQVVQHT
AGKDVFRSQG KSGTPSRSFL FDPASNIDTG TAYLAMLNNV YLGGIDNPTS RRYAVITAYN
GGAGSVLRVF SNDKIQAANI INTMTPGDVY QTLTTRHPSA ESRRYLYKVN TAQKSYRRR