Gene SbBS512_E3386 details

Gene Information

• Locus tag: SbBS512_E3386
• Symbol: rdgB
• ID: 6272190
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 3149904
• End bp: 3150497
• Gene Length: 594 bp
• Protein Length: 197 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641727277
• Product: putative deoxyribonucleotide triphosphate pyrophosphatase
• Protein accession: YP_001881727
• Protein GI: 187730440
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0127] Xanthosine triphosphate pyrophosphatase
• TIGRFAM ID: [TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family

Plasmid Coverage information

• Num covering plasmid clones: 41
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAAAG TTGTCCTCGC AACCGGCAAT GCCGGTAAAG TGCGTGAGCT GGCGTCGCTG 
CTTAGCGACT TTGGTCTTGA TATCGTGGCA CAAACAGACC TCGGCGTTGA TTCCGCTGAA 
GAAACCGGCC TAACCTTTAT CGAAAACGCG ATTCTGAAAG CGCGCCATGC GGCAAAAGTG 
ACCGGTTTAC CGGCAATTGC CGACGACTCT GGTCTGGCGG TAGATGCGCT GGGTGGCGCG 
CCGGGTATTT ACTCCGCGCG TTATTCCGGT GAAGACGCGA CCGATCAAAA GAATCTGCAA 
AAACTGTTGG AAACACTGAA AGACGTACCG GACGACCAAC GTCAGGCACG TTTCCACTGC 
GTGCTGGTAT ATCTGCGTCA CGCGGAAGAT CCGACTCCGC TGGTATGCCA CGGCAGCTGG 
CCGGGCGTGA TTACTCGCGA ACCAGCGGGC ACTGGTGGCT TTGGTTATGA TCCAATCTTC 
TTCGTACCTT CCGAAGGGAA AACCGCCGCC GAACTGACCC GCGAAGAAAA GAGCGCCATT 
TCCCACCGTG GTCAGGCGTT GAAACTGCTG CTGGACGCTT TACGTAATGG TTAA 

 

Protein sequence

MQKVVLATGN AGKVRELASL LSDFGLDIVA QTDLGVDSAE ETGLTFIENA ILKARHAAKV 
TGLPAIADDS GLAVDALGGA PGIYSARYSG EDATDQKNLQ KLLETLKDVP DDQRQARFHC 
VLVYLRHAED PTPLVCHGSW PGVITREPAG TGGFGYDPIF FVPSEGKTAA ELTREEKSAI 
SHRGQALKLL LDALRNG