Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3383 |
Symbol | |
ID | 6271269 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 3148321 |
End bp | 3149025 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641727274 |
Product | pyridoxal phosphate enzyme, YggS family |
Protein accession | YP_001881724 |
Protein GI | 187731481 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGATA TTGCGCATAA CCTGGCACAG GTCCGGGACA AAATCTCAGC GGCTGCAACG CGTTGCGGCC GTTCTCCAGA AGAAATTACG CTGCTTGCAG TCAGTAAAAC AAAACCTGCG AGCGCCATCG CAGAAGCCAT TGATGCCGGG CAGCGTCAAT TTGGTGAAAA CTACGTTCAG GAAGGGGTAG ATAAAATTCG CCACTTTCAG GAACTGGGCG TAACAGGATT AGAATGGCAT TTTATTGGCC CGTTGCAGTC TAATAAAAGC CGCCTGGTGG CAGAGCATTT CGACTGGTGT CATACCATCG ACCGTTTGCG CATTGCTACC CGCCTCAACG ATCAGCGCCC GGCAGAACTT CCCCCTCTTA ACGTACTGAT TCAAATTAAT ATTAGTGATG AAAACAGTAA GTCTGGGATT CAACTGGCAG AACTGGACGA GCTGGCAGCG GCGGTCGCTG AACTACCGCG TTTACGTCTG CGCGGGCTGA TGGCAATCCC TGCGCCTGAG TCAGAATATG TAAGGCAGTT TGAAGTTGCA CGCCAAATGG CTGTAGCATT TGCCGGACTG AAAACGCGCT ACCCGCATAT CGACACGCTC TCTCTGGGAA TGTCGGACGA TATGGAAGCC GCCATTGCGG CAGGTAGCAC GATGGTTCGT ATCGGCACTG CAATTTTTGG TGCGCGTGAT TACTCTAAAA AATAA
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Protein sequence | MNDIAHNLAQ VRDKISAAAT RCGRSPEEIT LLAVSKTKPA SAIAEAIDAG QRQFGENYVQ EGVDKIRHFQ ELGVTGLEWH FIGPLQSNKS RLVAEHFDWC HTIDRLRIAT RLNDQRPAEL PPLNVLIQIN ISDENSKSGI QLAELDELAA AVAELPRLRL RGLMAIPAPE SEYVRQFEVA RQMAVAFAGL KTRYPHIDTL SLGMSDDMEA AIAAGSTMVR IGTAIFGARD YSKK
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