Gene SbBS512_E3367 details

Gene Information

• Locus tag: SbBS512_E3367
• Symbol: tktA
• ID: 6271850
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 3132864
• End bp: 3134855
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 641727258
• Product: transketolase
• Protein accession: YP_001881708
• Protein GI: 187733279
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0021] Transketolase
• TIGRFAM ID: [TIGR00232] transketolase, bacterial and yeast

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCTCAC GTAAAGAGCT TGCCAATGCT ATTCGTGCGC TGAGCATGGA CGCAGTACAG 
AAAGCCAAAT CCGGTCACCC GGGTGCCCCT ATGGGTATGG CTGACATTGC CGAAGTCCTG 
TGGCGTGATT TCCTGAAACA CAACCCGCAG AATCCGTCCT GGGCTGACCG TGACCGCTTC 
GTGCTGTCCA ACGGCCACGG CTCCATGCTG ATCTACAGCC TGCTGCACCT CACCGGTTAC 
GATCTGCCGA TGGAAGAACT GAAAAACTTC CGTCAGCTGC ACTCTAAAAC TCCGGGCCAC 
CCGGAAGTGG GTTACACCGC TGGTGTGGAA ACCACCACCG GTCCGCTGGG TCAGGGTATT 
GCCAACGCAG TCGGTATGGC GATTGCAGAA AAAACGCTGG CGGCGCAGTT TAACCGTCCG 
GGCCACGACA TTGTCGACCA CTACACCTAC GCCTTCATGG GCGACGGCTG CATGATGGAA 
GGCATCTCCC ACGAAGTTTG CTCTCTGGCG GGTACGCTGA AGCTGGGTAA ACTGATTGCG 
TTCTACGATG ACAACGGTAT CTCTATTGAT GGTCACGTTG AAGGCTGGTT CACCGACGAC 
ACCGCAATGC GTTTCGAAGC TTACGGCTGG CACGTTATTC GCGACATCGA CGGTCATGAC 
GCGGCATCCA TCAAACGCGC AGTAGAAGAA GCGCGCGCAG TGACTGACAA ACCGTCCCTG 
CTGATGTGCA AAACCATCAT CGGTTTCGGT TCCCCGAACA AAGCCGGTAC TCACGACTCC 
CACGGTGCGC CGCTGGGCGA CGCTGAAATT GCCCTGACCC GCGAACAGCT GGGCTGGAAA 
TATGCACCGT TCGAAATCCC GTCTGAAATC TATGCTCAGT GGGATGCGAA AGAAGCAGGC 
CAGGCGAAAG AATCCGCATG GAACGAGAAA TTCGCTGCTT ACGCGAAAGC TTATCCGCAG 
GAAGCCGCTG AATTTACCCG CCGTATGAAA GGCGAAATGC CGTCTGACTT CGACGCGAAA 
GCAAAAGAGT TCATTGCTAA ACTGCAGGCT AACCCGGCGA AAATCGCCAG CCGTAAAGCG 
TCTCAGAATG CTATCGAAAC TTTCGGTCCG CTGTTGCCGG AATTCCTCGG CGGTTCTGCT 
GACCTGGCAC CGTCTAACCT GACCCTGTGG TCTGGTTCTA AAGCAATCAA CGAAGATGCT 
GCGGGTAACT ACATCCACTA CGGTGTTCGC GAGTTCGGTA TGACCGCGAT TGCTAACGGT 
ATCTCCCTGC ACGGTGGTTT CCTGCCGTAC ACCTCCACCT TCCTGATGTT CGTGGAATAC 
GCACGTAACG CCGTACGTAT GGCTGCGCTG ATGAAACAGC GTCAGGTGAT GGTTTACACC 
CACGACTCCA TCGGTCTGGG CGAAGATGGC CCGACTCACC AGCCGGTAGA GCAGGTCGCT 
TCTCTGCGCG TAACCCCGAA CATGTCTACA TGGCGTCCGT GTGACCAGGT TGAATCCGCG 
GTCGCGTGGA AATACGGTGT TGAGCGTCAG GACGGCCCGA CCGCACTGAT CCTCTCCCGT 
CAGAACCTGG CGCAGCAGGA ACGAACTGAA GAGCAACTGG CAAACATCGC GCGCGGTGGT 
TATGTGCTGA AAGACTGCGC CGGTCAGCCG GAACTGATTT TCATCGCTAC CGGTTCAGAA 
GTTGAACTGG CTGTTGCTGC CTACGAAAAA CTGACTGCCG AAGGCGTGAA AGCGCGCGTG 
GTGTCCATGC CGTCTACCGA CGCATTTGAC AAGCAGGATG CTGCTTACCG TGAATCCGTA 
CTGCCGAAAG CGGTTACTGC ACGCGTTGCG GTAGAAGCGG GTATTGCTGA CTACTGGTAC 
AAGTATGTTG GCCTGAATGG CGCTATCATC GGTATGACCA CCTTCGGTGA GTCAGCTCCG 
GCAGAGTTGC TGTTCAAAGA GTTCGGCTTC ACCGTCGACA ACGTCGTTGC GAAAGCAAAA 
GAACTGCTGT AA 

 

Protein sequence

MSSRKELANA IRALSMDAVQ KAKSGHPGAP MGMADIAEVL WRDFLKHNPQ NPSWADRDRF 
VLSNGHGSML IYSLLHLTGY DLPMEELKNF RQLHSKTPGH PEVGYTAGVE TTTGPLGQGI 
ANAVGMAIAE KTLAAQFNRP GHDIVDHYTY AFMGDGCMME GISHEVCSLA GTLKLGKLIA 
FYDDNGISID GHVEGWFTDD TAMRFEAYGW HVIRDIDGHD AASIKRAVEE ARAVTDKPSL 
LMCKTIIGFG SPNKAGTHDS HGAPLGDAEI ALTREQLGWK YAPFEIPSEI YAQWDAKEAG 
QAKESAWNEK FAAYAKAYPQ EAAEFTRRMK GEMPSDFDAK AKEFIAKLQA NPAKIASRKA 
SQNAIETFGP LLPEFLGGSA DLAPSNLTLW SGSKAINEDA AGNYIHYGVR EFGMTAIANG 
ISLHGGFLPY TSTFLMFVEY ARNAVRMAAL MKQRQVMVYT HDSIGLGEDG PTHQPVEQVA 
SLRVTPNMST WRPCDQVESA VAWKYGVERQ DGPTALILSR QNLAQQERTE EQLANIARGG 
YVLKDCAGQP ELIFIATGSE VELAVAAYEK LTAEGVKARV VSMPSTDAFD KQDAAYRESV 
LPKAVTARVA VEAGIADYWY KYVGLNGAII GMTTFGESAP AELLFKEFGF TVDNVVAKAK 
ELL