Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3333 |
Symbol | serA |
ID | 6270093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 3104306 |
End bp | 3105538 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641727232 |
Product | D-3-phosphoglycerate dehydrogenase |
Protein accession | YP_001881682 |
Protein GI | 187730934 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000027874 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAGG TATCGCTGGA GAAAGACAAG ATTAAGTTTC TGCTGGTAGA AGGCGTGCAC CAAAAGGCGC TGGAAAGCCT TCGTGCAGCT GGTTACACCA ACATCGAATT TCACAAAGGC GCGCTGGATG ATGAACAATT AAAAGAATCC ATCCGCGATG CCCACTTCAT CGGCCTGCGA TCCCGTACCC ATCTGACTGA AGACGTGATC AACGCCGCAG AAAAGCTGGT CGCTATTGGC TGTTTCTGTA TAGGAACAAA CCAGGTTGAT CTGGATGCGG CGGCAAAGCG CGGGATCCCG GTATTTAACG CACCGTTCTC AAATACGCGC TCTGTTGCGG AGCTGGTGAT TGGCGAACAG CTGCTGCTAT TGCGCGGCGT GCCGGAAGCC AATGCTAAAG CGCACCGTGG CGTGTGGAAC AAACTGGCGG CGGGTTCTTT TGAAGCGCGC GGCAAAAAGC TGGGTATCAT CGGCTACGGT CATATTGGTA CGCAATTGGG CATTCTGGCT GAATCGCTGG GAATGTATGT TTACTTTTAT GATATTGAAA ATAAACTGCC GCTGGGCAAC GCCACTCAGG TACAGCATCT TTCTGACCTG CTGAATATGA GCGATGTGGT GAGTCTGCAT GTACCAGAGA ATCCGTCCAC CAAAAATATG ATGGGCGCGA AAGAAATTTC ACTAATGAAG CCCGGCTCGC TGCTGATTAA TGCTTCGCGC GGTACTGTGG TGGATATTCC GGCGCTGTGT GATGCGCTGG CGAGCAAACA TCTGGCGGGG GCGGCAATCG ACGTATTCCC GACGGAACCG GCGACCAATA GCGATCCATT TACCTCTCCA CTGTGTGAAT TCGACAACGT ACTTCTGACG CCACACATTG GCGGTTCGAC TCAGGAAGCG CAGGAGAATA TCGGCCTGGA AGTTGCGGGT AAATTGATCA AGTATTCTGA CAATGGCTCA ACGCTCTCTG CGGTGAACTT CCCGGAAGTC TCGCTGCCAC TGCATGGTGG TCGTCGTCTG ATGCACATCC ACGAAAACCG TCCGGGCGTG CTAACTGCGC TGAACAAAAT CTTCGCCGAG CAGGGCGTCA ACATCGCCGC GCAATATCTA CAAACTTCCG CCCAGATGGG TTATGTAGTT ATTGATATTG AAGCTGACGA AGACGTTGCC GAAAAAGCGC TGCAGGCAAT GAAAGCTATT CCGGGTACCA TTCGCGCCCG TCTGCTGTAC TAA
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Protein sequence | MAKVSLEKDK IKFLLVEGVH QKALESLRAA GYTNIEFHKG ALDDEQLKES IRDAHFIGLR SRTHLTEDVI NAAEKLVAIG CFCIGTNQVD LDAAAKRGIP VFNAPFSNTR SVAELVIGEQ LLLLRGVPEA NAKAHRGVWN KLAAGSFEAR GKKLGIIGYG HIGTQLGILA ESLGMYVYFY DIENKLPLGN ATQVQHLSDL LNMSDVVSLH VPENPSTKNM MGAKEISLMK PGSLLINASR GTVVDIPALC DALASKHLAG AAIDVFPTEP ATNSDPFTSP LCEFDNVLLT PHIGGSTQEA QENIGLEVAG KLIKYSDNGS TLSAVNFPEV SLPLHGGRRL MHIHENRPGV LTALNKIFAE QGVNIAAQYL QTSAQMGYVV IDIEADEDVA EKALQAMKAI PGTIRARLLY
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