Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3328 |
Symbol | ubiH |
ID | 6269125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 3099076 |
End bp | 3100254 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641727225 |
Product | 2-octaprenyl-6-methoxyphenyl hydroxylase |
Protein accession | YP_001881677 |
Protein GI | 187732658 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism |
COG ID | [COG0654] 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases |
TIGRFAM ID | [TIGR01984] 2-polyprenyl-6-methoxyphenol 4-hydroxylase [TIGR01988] Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.0346766 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTAA TCATCGTCGG TGGCGGCATG GCGGGCGCGA CGCTGGCGCT GGCTATTTCC CGGTTAAGTC ACGGGGCGCT GCCGGTACAT TTGATTGAAG CGACTGCGCC AGAGTCACAT GCTCATCCGG GCTTTGATGG ACGAGCGATA GCGCTGGCGG CGGGTACCTG TCAGCAACTG GCGCGCATCG GCGTCTGGCA ATCTCTGGCG GATTGCGCAA CTGCCATCAC CACCGTGCAT GTCAGCGATC GTGGTCACGC TGGATTTGTC ACCCTCGCCG CAGAAGATTA CCAACTGGCG GCGCTGGGAC AGGTTGTCGA ATTGCACAAT GTCGGGCAAC GGCTGTTTGC ATTGCTGCGT AAAGCACCTG GCGTAACGCT GCATTGCCCT GATCGCGTGG CTAACGTTGC CCGTACTCAG AGTCACGTTG AAGTGACGCT GGAGAGTGGC GAGACGCTGA CGGGCCGCGT GCTGGTAGCA GCTGATGGCA CCCATTCAGC GTTAGCCACC GCGTGCGGCG TTGACTGGCA GCAGGAGCCT TACGAACAAC TGGCCGTGAT TGCCAACGTT GCGACTTCCG TTGCGCACGA AGGCCGCGCT TTTGAACGCT TCACGCAACA TGGCCCGCTG GCGATGTTGC CGATGTCTGA CGGACGCTGT TCGCTGGTCT GGTGTCATCC ACTGGAACGG CGCGAAGAGG TGCTGTCGTG GAGCGACGAG AAGTTTTGCC GTGAACTCCA GTCGGCCTTT GGCTGGCGAC TTGGAAAAAT TACCCACGCC GGTAAACGCA GTGCTTATCC GCTGGCGTTA ACCCGCGCCG CCAGAGCTAT TACCCATCGT ACCGTGCTGG TGGGCAATGC GGCGCAAACT CTGCACCCGA TTGCCGGGCA AGGGTTTAAC CTCGGTATGC GAGATGTCAT GAGCCTTGCG GAAACCCTGA CTCAGGCGCA TGAGCGCGGA GAAGACATCG GTGATTACGG CATATTGTGC CGCTATCAGC AGCGTCGACA GAGCGATCGC GAAGCAACCA TCGGCGTCAC GGACAGCCTG GTACATCTTT TTGCCAACCG TTGGGCACCG CTGGTTGTCG GGCGCAACAT CGGACTGATG ACGATGGAAT TATTCACCCC GGCACGCGAT GTGCTGGCGC AGCGCACCCT CGGTTGGGTG GCGCGTTGA
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Protein sequence | MSVIIVGGGM AGATLALAIS RLSHGALPVH LIEATAPESH AHPGFDGRAI ALAAGTCQQL ARIGVWQSLA DCATAITTVH VSDRGHAGFV TLAAEDYQLA ALGQVVELHN VGQRLFALLR KAPGVTLHCP DRVANVARTQ SHVEVTLESG ETLTGRVLVA ADGTHSALAT ACGVDWQQEP YEQLAVIANV ATSVAHEGRA FERFTQHGPL AMLPMSDGRC SLVWCHPLER REEVLSWSDE KFCRELQSAF GWRLGKITHA GKRSAYPLAL TRAARAITHR TVLVGNAAQT LHPIAGQGFN LGMRDVMSLA ETLTQAHERG EDIGDYGILC RYQQRRQSDR EATIGVTDSL VHLFANRWAP LVVGRNIGLM TMELFTPARD VLAQRTLGWV AR
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