Gene SbBS512_E3319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3319 
Symbol 
ID6273281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand+ 
Start bp3088051 
End bp3089031 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content54% 
IMG OID641727216 
Productputative global regulator 
Protein accessionYP_001881668 
Protein GI187731975 
COG category[R] General function prediction only 
COG ID[COG0354] Predicted aminomethyltransferase related to GcvT 
TIGRFAM ID[TIGR03317] folate-binding protein YgfZ 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTTTA CACCTTTTCC TCCCCGTCAG CCTACGGCTT CTGCCCGTTT ACCGCTGACG 
CTGATGACGC TTGATGACTG GGCGCTTGCC ACCATTACTG GCGCGGACAG CGAAAAATAT 
ATGCAGGGTC AGGTGACAGC AGATGTCAGC CAGATGACAG AAAATCAGCA CCTGCTCGCC 
GCCCATTGCG ACGCCAAAGG TAAAATGTGG AGCAATTTAC GTCTGTTCCG CGACGGCGAT 
GGCTTTGCGT GGATTGAACG GCGCAGCGTG CGTGAACCGC AGCTGACTGA ACTGAAAAAA 
TATGCGGTGT TCTCTAAAGT GACCATCGCG CCAGACGACG AGCGTGTGCT GCTTGGTGTT 
GCCGGTTTTC AGGCGCGCGC CGCGCTCGCC AATCTCTTTA GTGAACTACC TTCGAGAGAA 
AAACAGGTAG TTAAAGAAGG CGCGACCACT TTGCTATGGT TTGAACACCC GGCAGAACGT 
TTCCTGATCG TAACCGATGA AGCTACTGCC AATATGCTGA CCGATAAACT GCGCGGTGAA 
GCGGAACTGA ACAATAGCCA ACAGTGGCTG GCATTAAACA TTGAAGCGGG TTTCCCGGTG 
ATTGATGCCG CGAACAGCGG GCAGTTTATC CCACAGGCGA CCAATCTCCA GGCGCTGGGC 
GGTATCAGTT TTAAGAAAGG CTGTTATACC GGACAAGAGA TGGTGGCGCG AGCAAAATTC 
CGTGGTGCCA ATAAACGTGC GCTCTGGTTG CTGGCAGGTA GCGCCAGCCG ACTGCCGGAA 
GCTGGTGAAG ACTTAGAGCT GAAAATGGGC GAGAACTGGC GTCGTACCGG TACGGTGCTG 
GCTGCGGTAA AACTGGAAGA TGGTCAGGTC GTGGTACAGG TCGTCATGAA TAACGATATG 
GAACCGGACA GCATCTTCCG CGTACGCGAC GATGCGAATA CACTGCATAT CGAGCCGCTG 
CCGTATTCAC TCGAAGAGTA A
 
Protein sequence
MAFTPFPPRQ PTASARLPLT LMTLDDWALA TITGADSEKY MQGQVTADVS QMTENQHLLA 
AHCDAKGKMW SNLRLFRDGD GFAWIERRSV REPQLTELKK YAVFSKVTIA PDDERVLLGV 
AGFQARAALA NLFSELPSRE KQVVKEGATT LLWFEHPAER FLIVTDEATA NMLTDKLRGE 
AELNNSQQWL ALNIEAGFPV IDAANSGQFI PQATNLQALG GISFKKGCYT GQEMVARAKF 
RGANKRALWL LAGSASRLPE AGEDLELKMG ENWRRTGTVL AAVKLEDGQV VVQVVMNNDM 
EPDSIFRVRD DANTLHIEPL PYSLEE