| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3302 |
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| Symbol | |
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| ID | 6269856 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 3076056 |
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| End bp | 3077663 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641727202 |
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| Product | putative integrase |
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| Protein accession | YP_001881655 |
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| Protein GI | 187733613 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCAACT CAAGAACCTA CCTTTATCAG CGTAACGGTG TCTTTTACAT CCGTCTTAGA
ATGAAGAGCA CTGGTCGCCT GACCGCTTCG CTTCCCTCTC ATAACCGTTA TAAACTAGCG
TCAGTATCAC TACGGACTAA GGACAGACGC ACCGCTATGG CTCACTCACG GCACATCAAG
TCAGCACTTA AAGCAATCCA CGCAGATAAC CCTAACGCCT CTTATGAGGA GCTACGGGAG
CACCTGAAGA CCATTGTCGA GTGGGAGCTT AGTGTCAGCC GTGATGACCT GAACGACCCA
GAGTCCTACC AGCTTTACGT TGACCAGTAC GATGACATTA AGTCCAACCT TCGGGAAGCT
GTAGCGACTG AGCGTCTGAC TGTAGACCAG CATCGCTATA TCAATGACGT TATCGGTGTG
CTTAAGGCCT GTCAGGACAG ACTCAGGGGT GATAGCTCTG GCCTGTTGTC TTACCTTGAG
CCTGAGACCA GTAGTCTAAG ACCGTCCGTC TCCCTATCTG TATTGGCAGA TCCTGAAGTC
CCCGAACCTA AAGCTCTTAC CCTCGCGTCT CTCATTGAGC AGTACGAGCA GGAGAACGCC
CAGAACTGGA AGCCAGCGAC CCTAAGCGAG AACCGAGCGT CGCACTCCAC GCTAATCGAG
ATATTCGACT ATCTGGATAT TCAGGATGTC GGCAAGGCGA CCCGTTCAGA TATGCTCAGG
GTCCGTGAAG TCCTCCAGCA GATACCGAAG AACCGCAAGC AACGCTTTAA GTCTATGCCG
CTGTCTGACC TGCTGAACCG GGAGTCTAAG ACTGACTGTT TGGATGTCGT TACCATCAAC
AATAAATATC TTATCAAGAT GGCTGCTGTG TTTAAGTGGG CGGTACGCAA CGACTTGATA
GCTAAGAACC TGACCGAAGG TCTTGAGCTG AAAGTCCCGC AGCGTAAAGC CTCCGACGCT
CGTGATGCGT TCAGTCCTGA GCAGGTAGGG CAACTACTGG TCGCCGCTAA AGCGTACTCT
CAGAAGACCG CAGGTAAGCC ATACCATTAT TACGTCACCG CTCTGGCTGC GATCACTGGA
GCAAGACTTA ACGAGGTGGC CCAACTTCAG GTCAAAGACG TCAGGGTCAC TGAGGCCGGG
ACCGTGTATA TCCACATTAA CGAAGACGAT AGCAGCCTGC CGGGTAAGAG CGTTAAGAAT
GCGCATAGCG ACCGCTGTGT CCCGCTGGTC GATGGCGCTT ATGGTTTTGT ATTGGCTGAC
TTTGTGTCGC TTGTGGAAGA CCGTAGAAAG GCTGAGGGTG ATAATGCTAT GGTATTCGAT
GGCCTCAAGC TGATGAAGAA CGGCTACGGT GAGCAGGTGA GCAAATGGTT TAACCGAACG
TTGCTACCTA AAGTCCTTGC TGACCGTAGC GGCTTAGCGT TTCACTCGTT TAGACATACT
GTTGCGACCC AGTTAAAACA ACATGGGGTC GAGTTAGCAT ATGCTCAGGC GATTATGGGC
CATTCGAGCG GGTCCATAAC TTACGACCGT TACGCGAAAG AGGTTGAGGT AGATAGATTG
GTTAATGTGA TGGCTGGTGT TTATAAGGAG ACTGGAGTAA ATGGCTGA
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| Protein sequence | MLNSRTYLYQ RNGVFYIRLR MKSTGRLTAS LPSHNRYKLA SVSLRTKDRR TAMAHSRHIK
SALKAIHADN PNASYEELRE HLKTIVEWEL SVSRDDLNDP ESYQLYVDQY DDIKSNLREA
VATERLTVDQ HRYINDVIGV LKACQDRLRG DSSGLLSYLE PETSSLRPSV SLSVLADPEV
PEPKALTLAS LIEQYEQENA QNWKPATLSE NRASHSTLIE IFDYLDIQDV GKATRSDMLR
VREVLQQIPK NRKQRFKSMP LSDLLNRESK TDCLDVVTIN NKYLIKMAAV FKWAVRNDLI
AKNLTEGLEL KVPQRKASDA RDAFSPEQVG QLLVAAKAYS QKTAGKPYHY YVTALAAITG
ARLNEVAQLQ VKDVRVTEAG TVYIHINEDD SSLPGKSVKN AHSDRCVPLV DGAYGFVLAD
FVSLVEDRRK AEGDNAMVFD GLKLMKNGYG EQVSKWFNRT LLPKVLADRS GLAFHSFRHT
VATQLKQHGV ELAYAQAIMG HSSGSITYDR YAKEVEVDRL VNVMAGVYKE TGVNG
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