Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3276 |
Symbol | tldD |
ID | 6268962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 3047693 |
End bp | 3049138 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641727182 |
Product | protease TldD |
Protein accession | YP_001881635 |
Protein GI | 187730693 |
COG category | [R] General function prediction only |
COG ID | [COG0312] Predicted Zn-dependent proteases and their inactivated homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTCTTA ACCTGGTAAG TGAACAATTG CTAGCGGCGA ACGGCCTGAA ACATCAGGAC TTGTTCGCGA TCCTCGGTCA ACTGGCCGAA CGTCGCCTTG ATTATGGCGA TCTCTATTTT CAGTCGAGCT ATCACGAATC CTGGGTTTTA GAAGACCGCA TTATTAAAGA TGGTTCTTAC AACATCGATC AGGGCGTTGG CGTGCGTGCA ATCAGCGGTG AAAAAACCGG ATTTGCTTAC GCTGACCAAA TCAGCCTGCT GGCGCTGGAA CAGAGTGCGC AAGCGGCGCG CACCATCGTC CGTGATAGTG GTGATGGCAA AGTACAGACG CTGGGCGCGG TAGGGCATAG CCCGTTGTAT ACCTCGGTAG ATCCGCTGCA AAGCATGAGC CGTGAAGAGA AGCTGGATAT CCTGCGTCGC GTCGATAAGG TTGCTCGCGA AGCGGACAAG CGCGTACAGG AAGTGACTGC CAGCCTCAGT GGTGTCTATG AATTAATTCT GGTTGCGGCC ACCGACGGCA CGCTAGCGGC GGATGTCCGT CCGCTGGTGC GTCTTTCCGT GAGCGTTCTG GTCGAAGAAG ATGGCAAACG CGAACGCGGT GCCGGTGGCG GTGGCGGTCG TTTTGGTTAT GAGTTCTTCC TTGCCGATCT TGACGGCGAA GTCCGTGCGG ATGCATGGGC AAAAGAAGCA GTGCGTATGG CGCTGGTCAA TCTTTCTGCC GTTGCTGCAC CAGCGGGCAC CATGCCGGTA GTACTTGGCG CAGGTTGGCC GGGCGTGCTG TTGCATGAAG CGGTAGGTCA CGGTCTGGAA GGCGACTTCA ACCGCCGCGG CACTTCAGTA TTTAGTGGGC AGGTCGGGGA GCTGGTGGCT TCAGAACTGT GTACCGTGGT TGATGACGGC ACGATGGTCG ATCGCCGTGG TTCGGTGGCG ATTGATGACG AAGGTACGCC AGGCCAGTAC AACGTGCTGA TTGAGAACGG CATTCTGAAA GGCTACATGC AGGATAAACT CAACGCGCGT TTGATGGGGA TGACGCCGAC TGGCAACGGT CGCCGTGAAT CCTACGCCCA TCTGCCCATG CCGCGTATGA CCAACACCTA TATGCTGCCG GGTAAATCGA CCCCGCAGGA AATTATTGAA TCCGTTGAGT ACGGTATCTA TGCACCGAAC TTTGGTGGCG GTCAGGTGGA TATCACCTCC GGCAAATTCG TTTTCTCCAC TTCAGAAGCA TATCTGATTG AAAACGGTAA AGTAACGAAG CCGGTGAGAG GCGCAACGTT GATTGGTTCC GGTATCGAAA CCATGCAGCA GATTTCGATG GTTGGCAACG ACCTGAAACT GGATAACGGC GTAGGTGTCT GCGGTAAAGA AGGGCAAAGT TTGCCGGTTG GCGTGGGCCA GCCAACGCTG AAAGTTGATA ACCTGACTGT TGGCGGTACT GCGTAA
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Protein sequence | MTLNLVSEQL LAANGLKHQD LFAILGQLAE RRLDYGDLYF QSSYHESWVL EDRIIKDGSY NIDQGVGVRA ISGEKTGFAY ADQISLLALE QSAQAARTIV RDSGDGKVQT LGAVGHSPLY TSVDPLQSMS REEKLDILRR VDKVAREADK RVQEVTASLS GVYELILVAA TDGTLAADVR PLVRLSVSVL VEEDGKRERG AGGGGGRFGY EFFLADLDGE VRADAWAKEA VRMALVNLSA VAAPAGTMPV VLGAGWPGVL LHEAVGHGLE GDFNRRGTSV FSGQVGELVA SELCTVVDDG TMVDRRGSVA IDDEGTPGQY NVLIENGILK GYMQDKLNAR LMGMTPTGNG RRESYAHLPM PRMTNTYMLP GKSTPQEIIE SVEYGIYAPN FGGGQVDITS GKFVFSTSEA YLIENGKVTK PVRGATLIGS GIETMQQISM VGNDLKLDNG VGVCGKEGQS LPVGVGQPTL KVDNLTVGGT A
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