| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3239 |
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| Symbol | tdcA |
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| ID | 6270301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 3020069 |
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| End bp | 3021007 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641727150 |
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| Product | DNA-binding transcriptional activator TdcA |
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| Protein accession | YP_001881603 |
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| Protein GI | 187730393 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACTA TTCTTCTTCC GAAAACGCAG CACCTGGTAG TCTTTCAGGA AGTCATTAGA
AGTGGCTCTA TCGGCTCGGC TGCAAAAGAA TTAGGGTTAA CTCAACCGGC CGTCAGTAAA
ATCATTAACG ATATTGAAGA TTATTTTGGT GTGGAATTAG TGGTGCGGAA AAATACCGGT
GTAACATTAA CACCTGCCGG TCAATTGTTA CTCTCCCGTT CCGAATCCAT TACCCGTGAA
ATGAAAAATA TGGTTAATGA GATAAGCGGT ATGTCTTCTG AGGCGGTGGT GGAAGTCTCA
TTTGGTTTTC CTTCATTGAT TGGTTTTACT TTTATGTCAG GGATGATCAA CAAGTTCAAA
GAGGTGTTCC CGAAAGCGCA GGTTTCTATG TATGAAGCGC AACTGTCTTC GTTCTTACCG
GCAATCCGCG ACGGTCGACT GGATTTTGCG ATTGGTACGT TAAGTGCAGA AATGAAGCTT
CAGGATTTAC ATGTTGAGCC GCTGTTCGAG TCCGAGTTTG TGCTGGTAGC CAGTAAGTCC
CGAACATGCA CCGGCACCAC CACGCTGGAG TCGTTGAAGA ACGAACAGTG GGTGTTGCCA
CAAACCAATA TGGGGTACTA CAGCGAGCTT CTTACTACGT TACAAAGAAA TGGCATCAGT
ATTGAAAACA TCGTTAAAAC CGACTCAGTC GTGACAATTT ATAATCTTAT TCTCAATGCT
GATTTCTTAA CTGTAATTCC TTGTGATATG ACGTCACCTT TTGGTTCAAA TCAATTTATT
ACTATTCCGG TTGAAGAAAC ATTACCTGTG GCACAATATG CCGCGGTATG GTCGAAAAAT
TATCGTATTA AAAAAGCAGC ATCGGTTTTG GTGGAATTAG CCAAAGAGTA TTCATCTTAT
AATGGGTGTA GACGAAGGCT ATTAATAGAA GTTGGTTAG
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| Protein sequence | MSTILLPKTQ HLVVFQEVIR SGSIGSAAKE LGLTQPAVSK IINDIEDYFG VELVVRKNTG
VTLTPAGQLL LSRSESITRE MKNMVNEISG MSSEAVVEVS FGFPSLIGFT FMSGMINKFK
EVFPKAQVSM YEAQLSSFLP AIRDGRLDFA IGTLSAEMKL QDLHVEPLFE SEFVLVASKS
RTCTGTTTLE SLKNEQWVLP QTNMGYYSEL LTTLQRNGIS IENIVKTDSV VTIYNLILNA
DFLTVIPCDM TSPFGSNQFI TIPVEETLPV AQYAAVWSKN YRIKKAASVL VELAKEYSSY
NGCRRRLLIE VG
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