Gene SbBS512_E3234 details

Gene Information

• Locus tag: SbBS512_E3234
• Symbol: garK
• ID: 6272185
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 3015352
• End bp: 3016497
• Gene Length: 1146 bp
• Protein Length: 381 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641727146
• Product: glycerate kinase I
• Protein accession: YP_001881599
• Protein GI: 187731510
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG1929] Glycerate kinase
• TIGRFAM ID: [TIGR00045] glycerate kinase

Plasmid Coverage information

• Num covering plasmid clones: 42
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAATCG TAATCGCCCC AGACTCTTAT AAAGAAAGTT TATCTGCCAG CGAGGTTGCG 
CAGGCGATAG AAAAAGGATT TCGGGAAATT TTTCCTGATG CACAGTACGT TTCTGTTCCG 
GTTGCCGACG GTGGCGAAGG AACGGTGGAA GCGATGATTG CAGCCACCCA GGGTTCCGAA 
CGTCACGCCT GGGTTACAGG GCCGTTGGGC GAGAAAGTGA ATGCCAGTTG GGGGATCTCC 
GGCGATGGCA AAACCGCGTT TATTGAAATG GCGGCGACCA GTGGGCTGGA GCTGGTACCT 
GCGGAAAAAC GCGATCCACT CGTGACCACT TCACGCGGCA CAGGCGAGTT AATCCTGCAG 
GCGCTGGAGA GCGGTGCGAC AAACATTATT ATCGGCATTG GCGGCAGCGC TACAAATGAT 
GGCGGCGCAG GCATGGTACA GGCGCTGGGG GCGAAATTAT GCGACGCCAA CGGCAATGAA 
ATTGGTTTTG GCGGCGGTAG TCTTAATACT CTGAATGATA TTGATATTTC CGGCCTCAAT 
CCGCGCTTAA AAGATTGCGT CATTCGCGTC GCTTGTGATG TCACCAATCC GCTGGTGGGC 
GATAACGGCG CATCGCGCAT CTTTGGCTCA CAAAAGGGAG CCAGTGAAGC GATGATTGTT 
GAGCTGGACA ATAACCTCTC TCACTATGCC GAGGTCATTA AAAAAGCGCT GCATGTTGAT 
GTGAAAGATG TCCCCGGCGC AGGAGCTGCG GGCGGTATGG GCGCGGCGCT GATGGCGTTT 
CTTGGTGCGG AACTGAAAAG TGGTATTGAA ATCGTCACTA CGGCGCTGAA TCTGGAAGAA 
CATATTCACG ATTGTACGCT GGTGATCACC GGTGAAGGGC GTATTGACAG CCAGAGTATT 
CACGGCAAGG TACCGATTGG TGTCGCAAAC GTGGCGAAGA AGTACCATAA ACCGGTGATT 
GGCATTGCGG GTAGCCTGAC CGATGATGTT GGCGTTGTAC ATCAGCATGG CATTGATGCG 
GTCTTCAGCG TATTGACCAG CATAGGTACG TTGGACGAAG CATTCCGCGG GGCTTATGAC 
AATATCTGCC GTGCTTCACG TAATATCGCC GCGACACTGG CGATTGGAAT GCGCAACGCG 
GGGTGA 

 

Protein sequence

MKIVIAPDSY KESLSASEVA QAIEKGFREI FPDAQYVSVP VADGGEGTVE AMIAATQGSE 
RHAWVTGPLG EKVNASWGIS GDGKTAFIEM AATSGLELVP AEKRDPLVTT SRGTGELILQ 
ALESGATNII IGIGGSATND GGAGMVQALG AKLCDANGNE IGFGGGSLNT LNDIDISGLN 
PRLKDCVIRV ACDVTNPLVG DNGASRIFGS QKGASEAMIV ELDNNLSHYA EVIKKALHVD 
VKDVPGAGAA GGMGAALMAF LGAELKSGIE IVTTALNLEE HIHDCTLVIT GEGRIDSQSI 
HGKVPIGVAN VAKKYHKPVI GIAGSLTDDV GVVHQHGIDA VFSVLTSIGT LDEAFRGAYD 
NICRASRNIA ATLAIGMRNA G