Gene SbBS512_E3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3233 
SymbolgarR 
ID6273096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp3014371 
End bp3015255 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content53% 
IMG OID641727145 
Producttartronate semialdehyde reductase 
Protein accessionYP_001881598 
Protein GI187732083 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR01505] 2-hydroxy-3-oxopropionate reductase 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTG GTTTTATTGG CCTGGGGATT ATGGGTAAAC CAATGAGTAA AAACCTTCTG 
AAAGCAGGTT ACTCGCTGGT GGTTGCTGAC CGTAACCCAG AAGCTATTGC TGACGTGATT
GCTGCAGGTG CAGAAACAGC GTCTACGGCT AAAGCGATCG CTGAACAGTG CGACGTCATC
ATAACCATGC TGCCAAACTC CCCTCATGTG AAAGAGGTGG CGCTGGGTGA GAATGGCATT
ATTGAAGGCG CGAAGCCAGG TACGGTATTG ATCGATATGA GTTCTATCGC ACCGCTGGCA
AGCCGTGAAA TCAGCGAAGC GCTGAAAGCG AAAGGCATTG ATATGCTGGA TGCTCCGGTG
AGCGGCGGTG AACCGAAAGC CATCGACGGT ACGCTGTCAG TGATGGTGGG CGGCGACAAG
GCTATTTTCG ACAAATACTA TGATTTGATG AAAGCGATGG CGGGTTCCGT GGTGCATACC
GGGGAAATCG GTGCAGGTAA CGTCACCAAA CTGGCAAATC AGGTCATTGT GGCGCTGAAT
ATTGCTGCGA TGTCAGAAGC GTTAACGCTG GCAACTAAAG CGGGCGTTAA CCCGGACCTG
GTTTATCAGG CAATTCGCGG TGGGCTGGCG GGCAGTACCG TGCTGGATGC CAAAGCGCCG
ATGGTGATGG ACCGCAACTT CAAGCCGGGC TTCCGCATTG ATCTGCATAT TAAGGATCTG
GCGAATGCGC TGGATACTTC TCACGGCGTC GGCGCGCAAC TGCCGCTCAC AGCTGCGGTT
ATGGAGATGA TGCAGGCACT GCGTGCAGAT GGTTTAGGAA CGGCGGATCA TAGCGCTCTG
GCGTGCTACT ACGAAAAACT GGCGAAAGTC GAAGTTACTC GTTAA
 
Protein sequence
MKVGFIGLGI MGKPMSKNLL KAGYSLVVAD RNPEAIADVI AAGAETASTA KAIAEQCDVI 
ITMLPNSPHV KEVALGENGI IEGAKPGTVL IDMSSIAPLA SREISEALKA KGIDMLDAPV
SGGEPKAIDG TLSVMVGGDK AIFDKYYDLM KAMAGSVVHT GEIGAGNVTK LANQVIVALN
IAAMSEALTL ATKAGVNPDL VYQAIRGGLA GSTVLDAKAP MVMDRNFKPG FRIDLHIKDL
ANALDTSHGV GAQLPLTAAV MEMMQALRAD GLGTADHSAL ACYYEKLAKV EVTR