| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3218 |
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| Symbol | gabP |
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| ID | 6272934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2998862 |
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| End bp | 3000262 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641727133 |
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| Product | gamma-aminobutyrate transporter |
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| Protein accession | YP_001881587 |
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| Protein GI | 187732176 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1113] Gamma-aminobutyrate permease and related permeases |
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| TIGRFAM ID | [TIGR01773] gamma-aminobutyrate permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCAAT CATCGCAACC ACATGAGTTA GGCGGCGGGC TGAAATCACG CCACGTCACC
ATGTTGTCTA TTGCCGGTGT TATCGGCGCA AGTCTGTTTG TCGGTTCCAG CGTCGCCATC
GCCGAAGCGG GCCCGGCGGT ATTACTGGCC TATCTGTTCG CCGGGCTACT GGTGGTTATG
ATTATGCGGA TGTTGGCGGA AATGGCGGTT GCCACGCCCG ATACCGGTTC GTTTTCCACC
TATGCCGATA AAGCCATTGG TCGCTGGGCG GGCTATACCA TCGGCTGGTT GTACTGGTGG
TTTTGGGTAC TGGTTATCCC GCTGGAAGCC AACATCGCCG CCATGATCCT GCACTCGTGG
GTTCCAGGCA TTCCCATCTG GTTATTTTCC CTCGTCATTA CCCTTGCCTT AACTGGCAGT
AATTTATTAA GCGTTAAAAA CTACGGCGAA TTTGAGTTCT GGCTGGCGCT GTGCAAAGTC
ATCGCTATCC TGGCCTTTAT TTTCCTTGGT GCAGTCGCAA TTAGCGGTTT TTACCCTTAT
GCCGAAGTGA GCGGGATCTC AAGATTGTGG GATAGCGGCG GCTTTATGCC CAACGGCTTC
GGTGCGGTAT TAAGCGCGAT GTTGATCACC ATGTTCTCGT TTATGGGCGC AGAAATTGTC
ACCATTGCCG CCGCGGAATC CGACACGCCG GAAAAACATA TTGTCCGCGC CACTAACTCG
GTTATCTGGC GTATTTCTAT CTTCTATTTG TGCTCTATTT TTGTCGTCGT GGCATTAATT
CCGTGGAATA TGCCCGGACT AAAAGCCGTC GGTTCTTATC GCTCGGTACT GGAATTGCTC
AATATTCCCC ATGCGAAATT AATCATGGAC TGTGTGATAT TACTTTCCGT AACCAGCTGC
CTGAACTCGG CGCTGTATAC CGCTTCCAGG ATGCTCTACT CCTTAAGCCG TCGCGGAGAT
GCGCCTGCGG TAATGGGTAA AATCAACCGC AGTAAAACCC CGTACGTGGC GGTGTTACTC
TCCACCGGCG CGGCATTCTT AACGGTGGTG GTGAACTATT ACGCGCCTGC GAAGGTATTT
AAATTTCTGA TCGACAGCTC CGGCGCTATC GCCCTGCTGG TTTATTTAGT CATCGCCGTT
TCACAGTTGC GGATGCGCAA AATTCTGCGA GCAGAAGGAA GCGAAATTCG CTTGCGCATG
TGGCTTTATC CCTGGCTCAC CTGGCTGGTC ATCGGCTTTA TTACCTTTGT GTTGGTAGTG
ATGCTATTCC GCCCGGCGCA ACAGTTAGAA GTGATCTCCA CCGACTTATT AGCAATAGGG
ATTATCTGTA CCGTGCCAAT TATGGCGCGC TGGAATAAGC TGATAATGTG GCAAAAAACA
CCCGTTCATA ATACGCGCTG A
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| Protein sequence | MGQSSQPHEL GGGLKSRHVT MLSIAGVIGA SLFVGSSVAI AEAGPAVLLA YLFAGLLVVM
IMRMLAEMAV ATPDTGSFST YADKAIGRWA GYTIGWLYWW FWVLVIPLEA NIAAMILHSW
VPGIPIWLFS LVITLALTGS NLLSVKNYGE FEFWLALCKV IAILAFIFLG AVAISGFYPY
AEVSGISRLW DSGGFMPNGF GAVLSAMLIT MFSFMGAEIV TIAAAESDTP EKHIVRATNS
VIWRISIFYL CSIFVVVALI PWNMPGLKAV GSYRSVLELL NIPHAKLIMD CVILLSVTSC
LNSALYTASR MLYSLSRRGD APAVMGKINR SKTPYVAVLL STGAAFLTVV VNYYAPAKVF
KFLIDSSGAI ALLVYLVIAV SQLRMRKILR AEGSEIRLRM WLYPWLTWLV IGFITFVLVV
MLFRPAQQLE VISTDLLAIG IICTVPIMAR WNKLIMWQKT PVHNTR
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