Gene SbBS512_E3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3212 
SymbolstpA 
ID6271424 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2996020 
End bp2996424 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content47% 
IMG OID641727127 
ProductDNA binding protein, nucleoid-associated 
Protein accessionYP_001881581 
Protein GI187730918 
COG category[R] General function prediction only 
COG ID[COG2916] DNA-binding protein H-NS 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones60 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGTAA TGTTACAAAG TTTAAATAAC ATTCGAACCC TCCGTGCGAT GGCTCGCGAA 
TTCTCCATTG ACGTTCTTGA AGAAATGCTC GAAAAATTCA GGGTTGTCAC TAAAGAAAGA
CGTGAAGAAG AAGAACAGCA GCAGCGTGAA CTGGCTGAGC GTCAGGAAAA AATTAGCACC
TGGCTGGAGC TGATGAAAGC TGACGGAATT AACCCGGAAG AGTTATTGGG TAATAGCTCT
GCTGCTGCAC CACGTGCTGG TAAAAAACGC CAGCCGCGTC CGGCGAAATA TAAATTCACT
GATGTTAACG GTGAAACTAA GACCTGGACC GGTCAGGGCC GTACACCGAA GCCAATTGCT
CAGGCGCTGG CAGAAGGTAA ATCTCTCGAC GATTTCCTGA TCTAA
 
Protein sequence
MSVMLQSLNN IRTLRAMARE FSIDVLEEML EKFRVVTKER REEEEQQQRE LAERQEKIST 
WLELMKADGI NPEELLGNSS AAAPRAGKKR QPRPAKYKFT DVNGETKTWT GQGRTPKPIA
QALAEGKSLD DFLI