| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3204 |
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| Symbol | nrdE |
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| ID | 6270028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2990262 |
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| End bp | 2992406 |
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| Gene Length | 2145 bp |
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| Protein Length | 714 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641727119 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_001881573 |
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| Protein GI | 187730558 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAACGA CAACCGCAGA ATGCCTGACG CAGGAAACGA TGGATTACCA CGCGCTGAAT
GCGATGCTTA ACCTCTACGA TAGCGCAGGT CGCATTCAGT TCGATAAAGA CCGCCAGGCC
GTTGACGCCT TTATGGCGAC GCATGTGCGT CCGAACAGTG TGACCTTCAG TAGCCAGCAG
CAGCGCCTGA ACTGGCTGGT CAACGAAGGT TACTATGATG AAAGCGTTCT TAATCGCTAC
TCTCGCGACT TTGTCATTAC GCTGTTTGCC CACGCACACA CCAGCGGTTT TCGTTTCCAG
ACATTCCTCG GGGCATGGAA GTTTTACACC AGCTATACGT TGAAGACATT CGACGGTAAA
CGTTATCTGG AAGATTTTGC CGATCGAGTC ACGATGGTGG CGCTGACGCT GGCACAAGGC
GATGCGACGC TGGCGTTGCA ACTGACCGAT GAAATGCTGT CAGGACGCTT TCAGCCAGCC
ACGCCGACAT TCCTCAACTG CGGTAAGCAG CAGCGCGGCG AACTGGTTTC CTGTTTTCTG
CTGCGTATTG AAGACAATAT GGAGTCGATT GGCCGGGCGG TAAATTCCGC ACTGCAACTG
TCGAAACGCG GCGGCGGCGT GGCATTTTTG CTGTCGAATC TGCGAGAAGC GGGCGCGCCA
ATTAAACGTA TTGAAAATCA ATCTTCTGGC GTAATTCCGG TGATGAAAAT GCTGGAAGAC
GCATTTTCCT ATGCCAACCA ACTCGGCGCG CGTCAGGGGG CAGGTGCAGT CTATTTACAT
GCTCATCATC CCGATATTCT GCGTTTTCTC GATACAAAAC GGGAAAATGC CGACGAAAAA
ATCCGCATTA AAACACTGTC GCTGGGCGTG GTGATCCCGG ATATCACTTT CCATCTGGCA
AAAGAGAATG CGCAGATGGC GCTGTTTTCG CCCTATGACG TTGAGCGAGT TTATGGCAAG
CCGTTTGCCG ATATCGCCAT CAGCGAACAC TATGACGAAC TGGTTGCCGA TGAACGCATC
CGCAAAAAAT ACCTCAACGC CCGTGATTTC TTCCAGCGGC TGGCAGAAAT CCAGTTTGAG
TCCGGCTATC CCTACATCAT GTATGAAGAC ACGGTAAACC GTGCTAACCC TGTCGCCGGG
CGCATAAATA TGAGTAATCT CTGCTCAGAG ATTTTGCAGG TCAACTGTGC CTCAGAGTAT
GACGAGAATC TCGACTATGC CCGCACAGGC CATGATATCT CCTGCAATTT AGGTTCGTTG
AATATTGCGC ACACCATGGA TTCCCCCGAT TTTGCCCGCA CGGTAGAGAC TGCCGTGCGC
GGTTTAACGG CGGTGTCAGA TATGAGTCAT ATCCGCAGCG TGCCGTCCAT CGAAGCCGGA
AATGCCGCCT CACACGCCAT CGGACTGGGG CAGATGAATT TACACGGCTA TCTGGCGCGA
GAAGGCATCG CTTATGGTTC GCCGGAAGCA CTGGATTTCA CCAATCTCTA TTTCTATGCC
ATCACCTGGC ACGCACTGCG TACCTCGATG TTGCTGGCGC GCGAACGCGG TGAAACCTTC
GCCGGGTTCA AACAGTCACG TTATGCCAGT GGTGAATATT TTAGCCAATA TCTGCAAGGT
AACTGGCAGC CGAAAACGGC GAAAGTTGGC GAACTGTTTG CCCGCAGCGG TATTACGTTA
CCTACCCGTG AGATGTGGGC GCAACTGCGC GACGACGTGA TGCGCTACGG CATTTATAAC
CAGAATCTTC AGGCGGTGCC GCCAACCGGT TCTATCTCTT ATATCAACCA TGCTACGTCG
AGTATTCATC CGATTGTGGC GAAAGTAGAG ATACGCAAAG AGGGCAAAAC AGGACGCGTT
TACTACCCTG CCCCGTTTAT GACTAACGAG AATCTGGCGC TGTATCAGGA TGCTTACGAA
ATCGGCGCAG AAAAGATCAT CGACACCTAC GCCGAAGCGA CTCGCCATGT CGATCAGGGG
CTGTCGCTGA CGCTGTTTTT CCCCGATACC GCCACCACTC GCGATATCAA CAAAGCGCAG
ATTTACGCCT GGCGCAAGGG TATCAAAACG CTCTATTACA TTCGCCTGCG TCAGATGGCG
CTGGAAGGCA CTGAAATTGA AGGCTGCGTC TCCTGTGCAC TTTAA
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| Protein sequence | MATTTAECLT QETMDYHALN AMLNLYDSAG RIQFDKDRQA VDAFMATHVR PNSVTFSSQQ
QRLNWLVNEG YYDESVLNRY SRDFVITLFA HAHTSGFRFQ TFLGAWKFYT SYTLKTFDGK
RYLEDFADRV TMVALTLAQG DATLALQLTD EMLSGRFQPA TPTFLNCGKQ QRGELVSCFL
LRIEDNMESI GRAVNSALQL SKRGGGVAFL LSNLREAGAP IKRIENQSSG VIPVMKMLED
AFSYANQLGA RQGAGAVYLH AHHPDILRFL DTKRENADEK IRIKTLSLGV VIPDITFHLA
KENAQMALFS PYDVERVYGK PFADIAISEH YDELVADERI RKKYLNARDF FQRLAEIQFE
SGYPYIMYED TVNRANPVAG RINMSNLCSE ILQVNCASEY DENLDYARTG HDISCNLGSL
NIAHTMDSPD FARTVETAVR GLTAVSDMSH IRSVPSIEAG NAASHAIGLG QMNLHGYLAR
EGIAYGSPEA LDFTNLYFYA ITWHALRTSM LLARERGETF AGFKQSRYAS GEYFSQYLQG
NWQPKTAKVG ELFARSGITL PTREMWAQLR DDVMRYGIYN QNLQAVPPTG SISYINHATS
SIHPIVAKVE IRKEGKTGRV YYPAPFMTNE NLALYQDAYE IGAEKIIDTY AEATRHVDQG
LSLTLFFPDT ATTRDINKAQ IYAWRKGIKT LYYIRLRQMA LEGTEIEGCV SCAL
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