Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3201 |
Symbol | proW |
ID | 6273288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2986679 |
End bp | 2987743 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 641727116 |
Product | glycine betaine transporter membrane protein |
Protein accession | YP_001881570 |
Protein GI | 187731166 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4176] ABC-type proline/glycine betaine transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGATC AAAATAATCC GTGGGATACC ACGCCAGCGG CGGACAGTGC CGTGCAATCC GCAGACGCCT GGGGTACACC GGCGACTGCA CCGACTGACG GCGGTGGTGC TGACTGGCTG ACCAGTACGC CTGCGCCAAA CGTCGAGCAT TTTAATATTC TCGATCCGTT CCATAAAACG CTGATCCCGC TCGACAGTTG GGTCACTGAA GGGATCGACT GGGTTGTTAC CCATTTCCGT CCCGTCTTCC AGGGCGTGCG CGTTCCGGTT GATTATATCC TCAACGGTTT CCAGCAATTG CTGCTGGGTA TGCCCGCACC GGTGGCGATT ATCGTTTTCG CTCTCATCGC CTGGCAGATT TCCGGGGTCG GAATGGGCGT GGCGACGCTG GTTTCGCTGA TTGCCATCGG CGCAATCGGT GCCTGGTCGC AGGCCATGGT TACCCTGGCG CTGGTGTTAA CCGCCCTGCT GTTCTGTATC GTCATTGGTT TGCCGCTGGG GATCTGGCTG GCGAGAAGTC CGCGAGCGGC GAAAATTATT CGTCCACTGC TTGATGCCAT GCAGACCACG CCAGCGTTTG TTTATCTGGT GCCAATCGTC ATGCTATTTG GTATCGGTAA CGTGCCGGGC GTGGTGGTGA CGATCATCTT TGCTCTGCCG CCGATTATCC GTCTGACCAT TCTGGGGATT AACCAGGTTC CGGCGGATCT GATTGAAGCC TCGCGCTCAT TCGGTGCCAG CCCGCGCCAG ATGCTGTTCA AAGTTCAGTT ACCGCTGGCG ATGCCGACCA TTATGGCGGG CGTTAACCAG ACGCTGATGC TGGCCCTTTC TATGGTGGTC ATTGCCTCGA TGATTGCCGT CGGCGGGCTG GGTCAGATGG TACTTCGCGG TATCGGTCGT CTGGATATGG GGCTTGCCAC CGTTGGCGGC GTCGGGATTG TGATCCTCGC CATTATCCTC GATCGCCTGA CGCAGGCCGT TGGGCGCGAC TCACGCAGTC GCGGCAACCG TCGCTGGTAC ACCACTGGCC CTGTTGGTCT GCTGACCCGC CCATTCATTA AGTAA
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Protein sequence | MADQNNPWDT TPAADSAVQS ADAWGTPATA PTDGGGADWL TSTPAPNVEH FNILDPFHKT LIPLDSWVTE GIDWVVTHFR PVFQGVRVPV DYILNGFQQL LLGMPAPVAI IVFALIAWQI SGVGMGVATL VSLIAIGAIG AWSQAMVTLA LVLTALLFCI VIGLPLGIWL ARSPRAAKII RPLLDAMQTT PAFVYLVPIV MLFGIGNVPG VVVTIIFALP PIIRLTILGI NQVPADLIEA SRSFGASPRQ MLFKVQLPLA MPTIMAGVNQ TLMLALSMVV IASMIAVGGL GQMVLRGIGR LDMGLATVGG VGIVILAIIL DRLTQAVGRD SRSRGNRRWY TTGPVGLLTR PFIK
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