| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3191 |
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| Symbol | emrA |
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| ID | 6270474 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2980270 |
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| End bp | 2981442 |
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| Gene Length | 1173 bp |
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| Protein Length | 390 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641727107 |
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| Product | multidrug resistance protein A |
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| Protein accession | YP_001881561 |
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| Protein GI | 187730269 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR00998] efflux pump membrane protein (multidrug resistance protein A) |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.168067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAA ATGCGGAGAC TCAAACCCCG CAGCAACCGG TAAAGAAGAG CGGCAAACGT
AAGCGTCTGC TCCTCCTTCT CACCTTGCTC TTTATAATTA TTGCCGTAGC GATAGGGATT
TATTGGTTTT TGGTACTGCG TCATTTCGAA GAAACCGATG ACGCATACGT GGCAGGGAAT
CAGATTCAAA TTATGTCTCA GGTGTCTGGC AGCGTGACGA AAGTCTGGGC CGATAACACC
GATTTTGTAA AAGAAGGCGA TGTTCTGGTC ACTCTCGACC CGACAGATGC TCGCCAGGCG
TTTGAAAAAG CCAAAACTGC ACTGGCTTCC AGCGTTCGCC AAACCTACCA GCTGATGATT
AACAGCAAAC AGTTACAGGC GAATATTGAG GTGCAAAAAA TCGCCCTCGC GAAAGCACAA
AGCGACTACA ACCGCCGTGT GCCGCTGGGC AATGCCAACC TGATTGGTCG CGAAGAGCTG
CAACACGCCC GCGACGCCGT CACCAGTGCC CAGGCGCAAC TGGACGTCGC TATTCAACAA
TACAATGCCA ATCAGGCGAT GATTCTGGGG ACTAAACTGG AAGATCAGCC TGCCGTGCAA
CAGGCTGCCA CCGAAGTACG TAACGCCTGG CTGGCGCTGG AGCGTACCCG TATTGTCAGT
CCGATGACCG CTTATGTCTC CCGCCGCGCG GTACAGCCTG GGGCGCAAAT TAGCCCAACG
ACGCCGCTGA TGGCGGTCGT TCCAGCCACC AATATGTGGG TGGATGCCAA CTTTAAAGAG
ACGCAGATTG CCAATATGCG TATCGGTCAG CCGGTCACTA TCACCACGGA TATTTACGGC
GATGATGTGA AATACACCGG TAAAGTGGTT GGTCTGGATA TGGGCACAGG TAGCGCATTC
TCACTGCTTC CGGCGCAAAA TGCGACCGGT AACTGGATCA AAGTCGTTCA GCGTCTACCT
GTGCGTATCG AACTGGACCA GAAACAGCTG GAGCAATACT CGCTGCGCAT TGGTTTGTCC
ACGCTGGTGA GCGTCAATAC CACTAACCGT GACGGTCAGG TACTGGCAAA TAAAGTACGT
TCAACACCGG TCGCGGTAAG TACCGCGCGT GAAATCAGCC TGGCACCTGT CAATAAACTG
ATCGACGATA TCGTAAAAGC TAACGCTGGC TAA
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| Protein sequence | MSANAETQTP QQPVKKSGKR KRLLLLLTLL FIIIAVAIGI YWFLVLRHFE ETDDAYVAGN
QIQIMSQVSG SVTKVWADNT DFVKEGDVLV TLDPTDARQA FEKAKTALAS SVRQTYQLMI
NSKQLQANIE VQKIALAKAQ SDYNRRVPLG NANLIGREEL QHARDAVTSA QAQLDVAIQQ
YNANQAMILG TKLEDQPAVQ QAATEVRNAW LALERTRIVS PMTAYVSRRA VQPGAQISPT
TPLMAVVPAT NMWVDANFKE TQIANMRIGQ PVTITTDIYG DDVKYTGKVV GLDMGTGSAF
SLLPAQNATG NWIKVVQRLP VRIELDQKQL EQYSLRIGLS TLVSVNTTNR DGQVLANKVR
STPVAVSTAR EISLAPVNKL IDDIVKANAG
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