Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3180 |
Symbol | alaS |
ID | 6271728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2970992 |
End bp | 2973622 |
Gene Length | 2631 bp |
Protein Length | 876 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641727095 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_001881554 |
Protein GI | 187734262 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000000208446 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAAGA GCACCGCTGA GATCCGTCAG GCGTTTCTCG ACTTTTTCCA TAGTAAGGGA CATCAGGTAG TTGCCAGCAG CTCCCTGGTA CCCCATAACG ACCCAACTTT GTTGTTTACC AACGCCGGGA TGAATCAGTT CAAGGATGTG TTCCTTGGGC TCGACAAGCG TAATTATTCC CGCGCTACCA CTTCCCAACG CTGCGTGCGT GCGGGTGGTA AACACAACGA CCTGGAAAAC GTCGGTTACA CCGCGCGTCA CCATACCTTC TTCGAAATGC TGGGCAACTT CAGCTTCGGC GACTATTTCA AACACGATGC CATTCAGTTT GCATGGGAAC TGCTGACCAG CGAAAAATGG TTTGCCCTGC CGAAAGAGCG TCTGTGGGTT ACCGTCTATG AAAGCGACGA CGAAGCCTAC GAAATCTGGG AAAAAGAAGT CGGGATCCCG CGCGAACGTA TTATTCGCAT CGGCGATAAC AAAGGTGCGC CATACGCATC TGACAACTTC TGGCAGATGG GTGACACTGG TCCGTGCGGC CCGTGCACCG AAATCTTCTA CGATCACGGC GACCACATTT GGGGTGGCCC TCCGGGAAGT CCGGAAGAAG ACGGCGACCG CTACATTGAG ATCTGGAACA TCGTCTTCAT GCAGTTCAAC CGCCAGGCAG ATGGCACGAT GGAACCGCTG CCGAAGCCGT CTGTAGATAC CGGTATGGGT CTGGAGCGTA TTGCTGCGGT GCTGCAACAC GTTAACTCTA ACTATGACAT CGACCTGTTC CGCACGTTGA TCCAGGCGGT AGCGAAAGTC ACTGGCGCGA CCGATCTGAG CAATAAATCG CTGCGCGTAA TCGCTGACCA CATTCGTTCT TGTGCGTTCC TGATCGCGGA TGGCGTAATG CCGTCCAATG AAAACCGTGG TTATGTACTG CGTCGTATCA TTCGTCGCGC AGTGCGTCAC GGCAATATGC TCGGCGCGAA AGAAACCTTC TTCTACAAAC TGGTTGGTCC GCTGATCGAC GTTATGGGCT CTGCGGGTGA AGACCTGAAA CGCCAGCAGG CGCAGGTTGA GCAGGTGCTG AAGACTGAAG AAGAGCAGTT TGCCCGTACT CTGGAGCGCG GTCTGGCGTT GCTGGATGAA GAGCTGGCAA AACTTTCTGG TGATACGCTG GATGGTGAAA CGGCTTTCCG TCTGTACGAC ACCTATGGCT TCCCGGTTGA CCTGACGGCT GATGTTTGTC GTGAGCGCAA CATCAAAGTT GACGAAGCTG GTTTTGAAGC AGCAATGGAA GAGCAGCGTC GTCGCGCGCG CGAAGCCAGC GGCTTTGGTG CCGATTACAA CGCAATGATC CGTGTTGATA GTGCATCTGA ATTTAAAGGC TATGACCATC TGGAACTGAA CGGCAAAGTG ACCGCGCTGT TTGTTGATGG TAAAGCGGTT GATGCCATCA ATGCAGGCCA GGAAGCTGTG GTCGTGCTAG ATCAAACACC ATTCTATGCG GAATCCGGCG GTCAGGTTGG TGATAAAGGC GAACTGAAAG GCGCTAACTT CTCCTTCGCG GTGGAAGATA CGCAGAAATA CGGCCAGGCG ATTGGTCACA TCGGTAAACT TGCTGCGGGT TCTCTGAAAG TGGGCGACGC TGTGCAGGCT GATGTTGATG AGGCTCGTCG CGCCCGTATT CGTCTGAATC ACTCCGCAAC GCACCTGATG CACGCTGCGC TGCGCCAGGT TCTGGGGACT CATGTATCGC AGAAAGGTTC ACTGGTTAAC GACAAGGTGC TGCGCTTCGA CTTCTCACAC AACGAAGCGA TGAAACCGGA AGAGATTCGT GTGGTCGAAG ACCTGGTGAA CGCACAGATT CGTCGCAATT TGCCGATCGA AACCAACATC ATGGATCTCG AAGCGGCGAA AGCGAAAGGT GCGATGGCGC TGTTCGGCGA GAAGTATGAT GAGCGTGTAC GCGTGCTGAG CATGGGCGAT TTCTCCACCG AGCTGTGTGG CGGTACTCAC GCCAGCCGCA CTGGTGATAT TGGTCTGTTC CGCATCATCT CTGAATCGGG TACTGCTGCA GGCGTTCGTC GTATCGAAGC GGTAACCGGA GAAGGCGCTA TCACCACCGT TCATGCAGAC AGCGATCGCT TAAGCGAAGT CGCGCATCTG CTGAAAGGCG ATAGCAATAA TCTGGCGGAT AAAGTGCGCT CAGTACTGGA ACGTACGCGT CAGTTAGAAA AAGAACTACA ACAGCTTAAA GAACAAGCTG CCGCACAGGA GAGCGCAAAT CTTTCCAGTA AGGCAATTGA TGTTAATGGT GTTAAGCTGT TGGTTAGCGA GCTTAGCGGT GTTGAGCCGA AAATGTTGCG TACCATGGTT GACGATTTAA AAAATCAGCT GGGGTCGACA ATTATCGTGC TGGCAACGGT AGCCGAAGGT AAGGTTTCTC TGATTGCGGG CGTATCTAAG GACGTCACAG ATCGTGTGAA AGCAGGGGAA CTGATTGGTA TGGTCGCTCA GCAGGTGGGC GGCAAGGGTG GTGGACGTCC TGACATGGCG CAAGCCGGTG GTACGGATGC TGCGGCCTTA CCTGCAGCGT TAGCCAGTGT GAAAGGCTGG GTCAGCGCGA AATTGCAATA A
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Protein sequence | MSKSTAEIRQ AFLDFFHSKG HQVVASSSLV PHNDPTLLFT NAGMNQFKDV FLGLDKRNYS RATTSQRCVR AGGKHNDLEN VGYTARHHTF FEMLGNFSFG DYFKHDAIQF AWELLTSEKW FALPKERLWV TVYESDDEAY EIWEKEVGIP RERIIRIGDN KGAPYASDNF WQMGDTGPCG PCTEIFYDHG DHIWGGPPGS PEEDGDRYIE IWNIVFMQFN RQADGTMEPL PKPSVDTGMG LERIAAVLQH VNSNYDIDLF RTLIQAVAKV TGATDLSNKS LRVIADHIRS CAFLIADGVM PSNENRGYVL RRIIRRAVRH GNMLGAKETF FYKLVGPLID VMGSAGEDLK RQQAQVEQVL KTEEEQFART LERGLALLDE ELAKLSGDTL DGETAFRLYD TYGFPVDLTA DVCRERNIKV DEAGFEAAME EQRRRAREAS GFGADYNAMI RVDSASEFKG YDHLELNGKV TALFVDGKAV DAINAGQEAV VVLDQTPFYA ESGGQVGDKG ELKGANFSFA VEDTQKYGQA IGHIGKLAAG SLKVGDAVQA DVDEARRARI RLNHSATHLM HAALRQVLGT HVSQKGSLVN DKVLRFDFSH NEAMKPEEIR VVEDLVNAQI RRNLPIETNI MDLEAAKAKG AMALFGEKYD ERVRVLSMGD FSTELCGGTH ASRTGDIGLF RIISESGTAA GVRRIEAVTG EGAITTVHAD SDRLSEVAHL LKGDSNNLAD KVRSVLERTR QLEKELQQLK EQAAAQESAN LSSKAIDVNG VKLLVSELSG VEPKMLRTMV DDLKNQLGST IIVLATVAEG KVSLIAGVSK DVTDRVKAGE LIGMVAQQVG GKGGGRPDMA QAGGTDAAAL PAALASVKGW VSAKLQ
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