Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3135 |
Symbol | |
ID | 6270810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2927214 |
End bp | 2927990 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641727058 |
Product | hypothetical protein |
Protein accession | YP_001881517 |
Protein GI | 187731495 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3622] Hydroxypyruvate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTCGTT TTGCAGCTAA TTTATCCATG ATGTTCACCG AAGTGCCTTT TATTGAACGC TTCGCCGCAG CGCGAAAAGC CGGGTTCGAT GCTGTGGAAT TTCTGTTTCC CTATGACTAC TCCACCCTGC AAATCCAAAA GCAACTGGAG CAAAACCATC TGACACTGGC GCTGTTCAAT ACCGCTCCCG GAGATATTAA TGCGGGGGAA TGGGGATTAT CCGCCCTTCC CGGACGTGAG CACGAAGCAC ACGCAGACAT CGACCTGGCA CTGGAATATG CATTGGCGCT CAATTGTGAA CAAGTCCATG TGATGGCAGG CGTCGTGCCC GCTGGCGAAG ATGCTGAACG GTACCGGGCA GTATTTATCG ATAATCTCCG CTACGCTGCC GACCGCTTTG CACCACACGG CAAGCGAATA TTAGTTGAAG CACTCAGCCC CGACGTTAAG CCTCATTATC TCTTCTCCAG CCAGTATCAG GCACTGGCTA TTGTTGAAGA GGTTGCGCGA GATAACGTGT TTATTCAACT AGATACTTTT CATGCGCAAA AAGTAGATGG CAACCTGACG CATTTAATCC GCGACTACGC TGGGAAATAT GCGCACGTAC AAATTGCCGG ACTACCTGAT CGACATGAAC CGGACGATGG AGAAATCAAC TATCCGTGGC TGTTCCGCCT GTTCGATGAG GTGGGATATC AGGGCTGGAT CGGTTGTGAA TATAAACCTC GTGGCCTCAC CGAAGAAGGG CTTGGCTGGT TTGACGCCTG GCGCTAA
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Protein sequence | MPRFAANLSM MFTEVPFIER FAAARKAGFD AVEFLFPYDY STLQIQKQLE QNHLTLALFN TAPGDINAGE WGLSALPGRE HEAHADIDLA LEYALALNCE QVHVMAGVVP AGEDAERYRA VFIDNLRYAA DRFAPHGKRI LVEALSPDVK PHYLFSSQYQ ALAIVEEVAR DNVFIQLDTF HAQKVDGNLT HLIRDYAGKY AHVQIAGLPD RHEPDDGEIN YPWLFRLFDE VGYQGWIGCE YKPRGLTEEG LGWFDAWR
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