Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3102 |
Symbol | |
ID | 6272847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2899139 |
End bp | 2900476 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641727029 |
Product | major facilitator family transporter |
Protein accession | YP_001881488 |
Protein GI | 187732211 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00000189575 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACTT CACCGGTGCG AATGGATGAT TTACCGCTTA ACCGTTTTCA CTGCCGCATT GCTGCGCTCA CTTTCGGCGC ACACCTGACC GACGGTTATG TTCTCGGCGT CATTGGTTAC GCCATTATTC AGCTTACGCC CGCCATGCAA CTGACGCCGT TTATGGCGGG AATGATCGGC GGCTCGGCGC TCCTTGGTTT GTTCCTTGGC AGCCTGGTTC TTGGGTGGAT CTCCGACCAT ATTGGTCGGC AAAAAATCTT CACCTTCAGC TTTTTGCTGA TTACGCTTGC TTCGTTTTTA CAATTTTTTG CCACCACGCC AGAGCATCTT ATTGGACTGC GCATTTTGAT TGGCATTGGT CTGGGAGGCG ATTATTCAGT AGGTCACACC TTGCTGGCTG AATTTTCCCC GCGCCGCCAT CGCGGTATTT TGCTGGGCGC ATTCAGCGTG GTGTGGACCG TAGGCTATGT GCTGGCAAGT ATTGCCGGAC ATCACTTTAT TTCCGAAAAC CCGGAGGCCT GGCGCTGGCT ACTGGCATCG GCAGCTCTGC CCGCGTTGTT GATTACGTTA TTACGCTGGG GAACGCCAGA ATCACCACGC TGGCTACTGC GCCAGGGGCG TTTTGCAGAA GCTCACGCTA TCGTGCATCG CTATTTTGGT CCCCATGTTT TACTGGGCGA TGAAGTGGTA ACGGCGACCC ATAAACACAT CAAAACCTTG TTCTCTTCGC GTTACTGGCG GCGCACGGCG TTTAACAGCG TCTTCTTTGT CTGCCTCGTA ATCCCATGGT TTGTGATTTA TACCTGGCTG CCAACTATCG CCCAGACTAT TGGTCTGGAA GATGCGCTGA CTGCCAGCCT GATGCTTAAT GCGTTGTTAA TTGTGGGCGC GCTGCTGGGA TTAGTTCTGA CGCACCTGCT GGCACATCGC AAATTTTTGC TGGGAAGTTT TTTGCTGCTG GCGGCAACGC TGGTAGTAAT GGCCTGTTTG CCTTCCGGCA GTTCATTAAC GCTGCTGCTT TTTGTTCTCT TCAGCACCAC CATTTCGGCA GTCAGTAATC TGGTGGGCAT TTTGCCTGCG GAAAGTTTTC CTACTGACAT TCGCTCGCTG GGCGTCGGTT TTGCCACCGC CATGAGTCGA CTTGGCGCGG CGGTAAGTAC TGGCCTGCTG CCGTGGGTGC TGGCGCAGTG GGGAATGCAA GTCACCTTAT TGCTCCTGGC GACAGTGTTG TTGGTTGGTT TTGTTGTGAC CTGGCTATGG GCACCAGAAA CTAAAGCCCT CCCGCTGGTG GCGGCGGGAA ATGTAGGAGG TGCGAATGAA CATTCTGTTA GCGTTTAA
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Protein sequence | MNTSPVRMDD LPLNRFHCRI AALTFGAHLT DGYVLGVIGY AIIQLTPAMQ LTPFMAGMIG GSALLGLFLG SLVLGWISDH IGRQKIFTFS FLLITLASFL QFFATTPEHL IGLRILIGIG LGGDYSVGHT LLAEFSPRRH RGILLGAFSV VWTVGYVLAS IAGHHFISEN PEAWRWLLAS AALPALLITL LRWGTPESPR WLLRQGRFAE AHAIVHRYFG PHVLLGDEVV TATHKHIKTL FSSRYWRRTA FNSVFFVCLV IPWFVIYTWL PTIAQTIGLE DALTASLMLN ALLIVGALLG LVLTHLLAHR KFLLGSFLLL AATLVVMACL PSGSSLTLLL FVLFSTTISA VSNLVGILPA ESFPTDIRSL GVGFATAMSR LGAAVSTGLL PWVLAQWGMQ VTLLLLATVL LVGFVVTWLW APETKALPLV AAGNVGGANE HSVSV
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