Gene SbBS512_E3077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3077 
Symbol 
ID6269095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2872465 
End bp2873829 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content51% 
IMG OID641727004 
Producthypothetical protein 
Protein accessionYP_001881464 
Protein GI187731865 
COG category[R] General function prediction only 
COG ID[COG1611] Predicted Rossmann fold nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.465683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGATTACAC ATATTAGCCC GCTTGGCTCC ATGGATATGT TGTCGCAGCT GGAAGTGGAT 
ATGCTTAAAC GCACCGCCAG CAGCGACCTC TATCAACTGT TTCGCAACTG TTCACTTGCC
GTACTGAACT CCGGTAGTTT GACCGATAAC AGCAAAGAAT TGCTGTCTCG TTTTGAAAAT
TTCGATATTA ACGTCTTGCG CCGTGAACGC GGCGTAAAGC TGGAACTGAT TAATCCCCCG
GAAGAGGCTT TTGTCGATGG GCGAATTATT CGCGCTTTGC AGGCCAACTT GTTCGCGGTC
CTGCGTGACA TTCTCTTCGT TTACGGGCAA ATCCATAACA CCGTTCGTTT TCCCAACCTG
AATCTCGACA ACTCCGTCCA CATCACTAAC CTGGTCTTTT CCATCTTGCG TAACGCTCGC
GCGCTGCATG TGGGTGAAGC GCCAAATATG GTGGTCTGCT GGGGCGGTCA CTCAATTAAC
GAAAACGAGT ATTTGTATGC CCGTCGCGTC GGAAACCAGC TGGGCCTGCG TGAGCTGAAT
ATCTGCACCG GCTGTGGTCC GGGAGCGATG GAAGCGCCGA TGAAAGGTGC TGCGGTCGGA
CACGCGCAGC AGCGTTACAA AGACAGTCGT TTTATTGGTA TGACAGAGCC GTCGATTATC
GCCGCTGAAC CGCCTAACCC GCTGGTCAAC GAATTGATCA TCATGCCAGA TATCGAAAAA
CGTCTGGAAG CGTTTGTCCG TATCGCTCAC GGTATCATTA TCTTCCCTGG CGGTGTGGGT
ACGGCAGAAG AGTTGCTGTA TTTGCTGGGA ATTTTAATGA ACCCGGCCAA CAAAGATCAG
GTTTTACCAT TGATCCTCAC CGGCCCGAAA GAGAGCGCCG ACTACTTCCG CGTACTGGAC
GAGTTTGTCG TGCATACGCT GGGTGAAAAC GCGCGCCGCC ATTACCGCAT CATCATTGAT
GACGCCGCTG AAGTCGCTCG TCAGATGAAA AAATCGATGC CGCTGGTGAA AGAAAATCGC
CGCGACACAG GCGATGCCTA CAGCTTTAAC TGGTCAATGC GCATTGCGCC AGATTTGCAA
ATGCCGTTTG AGCCGTCTCA CGAGAATATG GCTAATCTGA AGCTTTACCC GGATCAACCC
GTTGAAGTGC TAGCTGCCGA CCTGCGCCGT GTGTTCTCCG GTATTGTGGC GGGTAACGTA
AAAGAAGTCG GTATTCGCGC CATTGAAGAG TTTGGTCCTT ACAAAATCAA CGGCGATAAA
GAGATTATGC GTCGTATGGA CGACCTGCTA CAGGGTTTTG TTGCCCAGCA TCGTATGAAG
TTGCCAGGCT CAGCCTACAT CCCTTGCTAC GAAATCTGCA CGTAA
 
Protein sequence
MITHISPLGS MDMLSQLEVD MLKRTASSDL YQLFRNCSLA VLNSGSLTDN SKELLSRFEN 
FDINVLRRER GVKLELINPP EEAFVDGRII RALQANLFAV LRDILFVYGQ IHNTVRFPNL
NLDNSVHITN LVFSILRNAR ALHVGEAPNM VVCWGGHSIN ENEYLYARRV GNQLGLRELN
ICTGCGPGAM EAPMKGAAVG HAQQRYKDSR FIGMTEPSII AAEPPNPLVN ELIIMPDIEK
RLEAFVRIAH GIIIFPGGVG TAEELLYLLG ILMNPANKDQ VLPLILTGPK ESADYFRVLD
EFVVHTLGEN ARRHYRIIID DAAEVARQMK KSMPLVKENR RDTGDAYSFN WSMRIAPDLQ
MPFEPSHENM ANLKLYPDQP VEVLAADLRR VFSGIVAGNV KEVGIRAIEE FGPYKINGDK
EIMRRMDDLL QGFVAQHRMK LPGSAYIPCY EICT