Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3074 |
Symbol | xni |
ID | 6269442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2868327 |
End bp | 2869172 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641727001 |
Product | exonuclease IX |
Protein accession | YP_001881461 |
Protein GI | 187730847 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.256005 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGAGGCC TCTTCCCGAT TTCTCATCCA GCCGTAGCCT GTTCCGGCAT CGAATGTTAC CCTTATCGCC TGATCTTTAA GGGGGTTATC GTGGCTGTTC ATTTGCTTAT TGTCGATGCA CTGAATCTTA TTCGTCGCAT TCATGCCGTT CAGGGATCGC CCTGTGTCGA AACCTGCCAG CATGCGCTCG ATCAGCTCAT TATGCACAGC CAGCCAACCC ACGCGGTCGC CGTTTTTGAT GATGAAAACC GCAGTAGCGG CTGGCGTCAT CAGCGTTTAC CAGATTACAA AGCGGGTCGA CCGCCAATGC CGGAAGAGTT GCACGACGAG ATGCCTGCAT TACGCGCCGC CTTTGAGCAA CGCGGCGTCC CGTGCTGGTC AACCAGCGGC AACGAAGCCG ATGACTTAGC CGCCACGCTG GCGGTCAAAG TGACACAGGC CGGGCATCAG GCAACGATTG TTTCGACAGA TAAAGGCTAC TGTCAGTTAC TTTCACCGAC ATTACGTATT CGTGATTACT TCCAGAAACG TTGGCTGGAT GCGCCATTTA TCGATAAAGA ATTTGGCGTT CAACCGCAGC AGTTGCCCGA TTACTGGGGA CTTGCGGGGA TCAGCAGTTC AAAGGTACCG GGTGTTGCGG GAATCGGACC AAAAAGCGCC ACGCAGCTGC TGGTCGAGTT TCAGAGTCTG GAAGGGATAT ATGAGAATCT GGATGCGGTT GCCGAAAAGT GGCGCAAAAA ATTAGAAACC CATAAAGAGA TGGCGTTTCT GTGCCGCGAT ATTGCCCGCT TACAAACCGA TTTGCATATC GACGGCAATT TACAGCAATT GCGGTTGGTA CGGTAA
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Protein sequence | MRGLFPISHP AVACSGIECY PYRLIFKGVI VAVHLLIVDA LNLIRRIHAV QGSPCVETCQ HALDQLIMHS QPTHAVAVFD DENRSSGWRH QRLPDYKAGR PPMPEELHDE MPALRAAFEQ RGVPCWSTSG NEADDLAATL AVKVTQAGHQ ATIVSTDKGY CQLLSPTLRI RDYFQKRWLD APFIDKEFGV QPQQLPDYWG LAGISSSKVP GVAGIGPKSA TQLLVEFQSL EGIYENLDAV AEKWRKKLET HKEMAFLCRD IARLQTDLHI DGNLQQLRLV R
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