Gene SbBS512_E3074 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3074 
Symbolxni 
ID6269442 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2868327 
End bp2869172 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content53% 
IMG OID641727001 
Productexonuclease IX 
Protein accessionYP_001881461 
Protein GI187730847 
COG category[L] Replication, recombination and repair 
COG ID[COG0258] 5'-3' exonuclease (including N-terminal domain of PolI) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.256005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGAGGCC TCTTCCCGAT TTCTCATCCA GCCGTAGCCT GTTCCGGCAT CGAATGTTAC 
CCTTATCGCC TGATCTTTAA GGGGGTTATC GTGGCTGTTC ATTTGCTTAT TGTCGATGCA
CTGAATCTTA TTCGTCGCAT TCATGCCGTT CAGGGATCGC CCTGTGTCGA AACCTGCCAG
CATGCGCTCG ATCAGCTCAT TATGCACAGC CAGCCAACCC ACGCGGTCGC CGTTTTTGAT
GATGAAAACC GCAGTAGCGG CTGGCGTCAT CAGCGTTTAC CAGATTACAA AGCGGGTCGA
CCGCCAATGC CGGAAGAGTT GCACGACGAG ATGCCTGCAT TACGCGCCGC CTTTGAGCAA
CGCGGCGTCC CGTGCTGGTC AACCAGCGGC AACGAAGCCG ATGACTTAGC CGCCACGCTG
GCGGTCAAAG TGACACAGGC CGGGCATCAG GCAACGATTG TTTCGACAGA TAAAGGCTAC
TGTCAGTTAC TTTCACCGAC ATTACGTATT CGTGATTACT TCCAGAAACG TTGGCTGGAT
GCGCCATTTA TCGATAAAGA ATTTGGCGTT CAACCGCAGC AGTTGCCCGA TTACTGGGGA
CTTGCGGGGA TCAGCAGTTC AAAGGTACCG GGTGTTGCGG GAATCGGACC AAAAAGCGCC
ACGCAGCTGC TGGTCGAGTT TCAGAGTCTG GAAGGGATAT ATGAGAATCT GGATGCGGTT
GCCGAAAAGT GGCGCAAAAA ATTAGAAACC CATAAAGAGA TGGCGTTTCT GTGCCGCGAT
ATTGCCCGCT TACAAACCGA TTTGCATATC GACGGCAATT TACAGCAATT GCGGTTGGTA
CGGTAA
 
Protein sequence
MRGLFPISHP AVACSGIECY PYRLIFKGVI VAVHLLIVDA LNLIRRIHAV QGSPCVETCQ 
HALDQLIMHS QPTHAVAVFD DENRSSGWRH QRLPDYKAGR PPMPEELHDE MPALRAAFEQ
RGVPCWSTSG NEADDLAATL AVKVTQAGHQ ATIVSTDKGY CQLLSPTLRI RDYFQKRWLD
APFIDKEFGV QPQQLPDYWG LAGISSSKVP GVAGIGPKSA TQLLVEFQSL EGIYENLDAV
AEKWRKKLET HKEMAFLCRD IARLQTDLHI DGNLQQLRLV R