Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E3062 |
Symbol | gcvA |
ID | 6270227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2860555 |
End bp | 2861472 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641726993 |
Product | DNA-binding transcriptional activator GcvA |
Protein accession | YP_001881453 |
Protein GI | 187733581 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000000000830878 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAAAC GATTACCACC GCTAAATGCC TTACGAGTTT TTGATGCCGC AGCACGCCAT TTAAGTTTCA CTCGCGCAGC AGAAGAGCTT TTTGTGACCC AGGCCGCAGT AAGTCATCAA ATCAAGTCTC TTGAGGATTT TTTGGGGCTA AAACTGTTCC GCCGCCGTAA TCGTTCACTC CTGCTGACCG AGGAAGGGCA AAGCTATTTC CTCGATATCA AAGAGATATT TTCGCAATTA ACCGAAGCGA CGCGTAAACT CCAGGCCCGT AGCGCCAAGG GGGCGTTGAC GGTCAGTTTA CTCCCCAGTT TCGCCATTCA TTGGTTGGTT CCGCGACTTT CCAGCTTTAA TTCAGCTTAT CCGGGAATTG ACGTTCGAAT CCAGGCGGTT GATCGTCAGG AAGATAAGCT GGCGGATGAT GTTGATGTGG CGATATTTTA TGGTCGGGGC AACTGGCCGG GGCTACGGGT GGAAAAACTG TACGCCGAAT ATTTATTGCC GGTGTGTTCG CCGCTACTGC TGACTGGCGA AAAACCCTTG AAGACACCGG AAGATCTGGC TAAACATACG TTATTACATG ATGCTTCGCG CCGTGACTGG CAGACATATA CCCGACAGTT GGGGTTAAAT CATATCAACG TTCAGCAAGG GCCAATTTTT AGCCATAGCG CCATGGTGCT GCAAGCGGCT ATCCACGGGC AGGGAGTGGC GCTGGCAAAT AACGTGATGG CGCAATCTGA AATCGAGGCC GGACGTCTTG TTTGCCCGTT TAATGATGTT CTGGTCAGTA AAAACGCTTT TTATCTGGTT TGTCATGACA GCCAGGCAGA ACTGGGTAAA ATAGCCGCCT TTCGCCAATG GATCCTGGCG AAAGCCGCTG CTGAACAAGA AAAATTCCGC TTTCGTTATG AACAATAA
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Protein sequence | MSKRLPPLNA LRVFDAAARH LSFTRAAEEL FVTQAAVSHQ IKSLEDFLGL KLFRRRNRSL LLTEEGQSYF LDIKEIFSQL TEATRKLQAR SAKGALTVSL LPSFAIHWLV PRLSSFNSAY PGIDVRIQAV DRQEDKLADD VDVAIFYGRG NWPGLRVEKL YAEYLLPVCS PLLLTGEKPL KTPEDLAKHT LLHDASRRDW QTYTRQLGLN HINVQQGPIF SHSAMVLQAA IHGQGVALAN NVMAQSEIEA GRLVCPFNDV LVSKNAFYLV CHDSQAELGK IAAFRQWILA KAAAEQEKFR FRYEQ
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