Gene SbBS512_E3059 details

Gene Information

• Locus tag: SbBS512_E3059
• Symbol: csdE
• ID: 6270401
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 2858137
• End bp: 2858580
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 55%
• IMG OID: 641726989
• Product: cysteine desulfurase, sulfur acceptor subunit CsdE
• Protein accession: YP_001881450
• Protein GI: 187731898
• COG category: [R] General function prediction only
• COG ID: [COG2166] SufE protein probably involved in Fe-S center assembly
• TIGRFAM ID: [TIGR03391] cysteine desulfurase, sulfur acceptor subunit CsdE

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 0.00674257
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACAAACC CGCAATTCGC CGGACATCCG TTCGGCACAA CCGTAACCGC AGAAACGTTA 
CGCAATACCT TCGCACCGTT GACGCAATGG GAAGATAAAT ATCGCCAGTT GATCATGCTG 
GGGAAACAGC TTCCGGCTTT GCCAGACGAG TTAAAAGCGC AGGCTAAAGA GATTGCCGGA 
TGCGAAAACC GCGTCTGGCT GGGATATACC GTGGCTGAAA ACGGTAAAAT GCACTTCTTT 
GGCGACAGCG AAGGGCGCAT TGTGCGCGGC CTGTTGGCGG TGTTGTTGAC TGCCGTTGAG 
GGGAAAACCG CCGCCGAATT ACAGGCACAG TCGCCGCTGG CATTGTTTGA TGAGCTGGGA 
TTGCGTGGGC AGCTTAGCGC CTCACGCAGC CAGGGGTTGA ATGCGTTAAG CGAGGCAATT 
ATCGCTGCGG CGAAGCAGGT TTAA 

 

Protein sequence

MTNPQFAGHP FGTTVTAETL RNTFAPLTQW EDKYRQLIML GKQLPALPDE LKAQAKEIAG 
CENRVWLGYT VAENGKMHFF GDSEGRIVRG LLAVLLTAVE GKTAAELQAQ SPLALFDELG 
LRGQLSASRS QGLNALSEAI IAAAKQV