| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3045 |
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| Symbol | amiC |
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| ID | 6269859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 2849428 |
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| End bp | 2850681 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641726978 |
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| Product | N-acetylmuramoyl-L-alanine amidase AmiC |
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| Protein accession | YP_001881442 |
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| Protein GI | 187730180 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGGAT CCAACACTGC AATCAGCCGT CGTCGTTTAC TGCAAGGCGC GGGTGCCATG
TGGCTATTGA GCGTAAGTCA GGTCAGTCTG GCTGCGGTCA GCCAGGTCGT GGCGGTGCGC
GTCTGGCCTG CGTCCAGCTA CACCCGTGTG ACGGTAGAAT CAAATCGTCA GCTGAAATAT
AAGCAGTTCG CGTTGAGTAA CCCTGAACGC GTGGTGGTGG ATATCGAAGA TGTAAACCTG
AACTCGGTAC TCAAGGGGAT GGCGGCACAA ATTCGTGCAG ACGACCCGTT CATCAAGTCG
GCGCGCGTCG GGCAATTTGA CCCGCAGACC GTACGGATGG TTTTTGAATT AAAGCAAAAC
GTAAAACCGC AGCTGTTTGC CCTTGCGCCG GTCGCCGGGT TTAAAGAGCG TCTGGTGATG
GACCTCTATC CGGCCAATGC ACAGGATATG CAGGACCCGC TGCTGGCGCT GCTGGAGGAT
TACAACAAAG GCGACCTCGA AAAGCAGGTG CCGCCAGCAC AAAGTGGTCC ACAACCGGGT
AAAGCAGGGC GCGATCGTCC TATTGTTATT ATGCTTGACC CTGGCCACGG CGGCGAAGAC
TCCGGTGCGG TGGGGAAATA CAAAACGCGC GAAAAAGACG TGGTATTGCA AATAGCTCGC
CGTCTGCGCT CTCTGATCGA GAAAGAGGGC AATATGAAGG TGTACATGAC GCGCAATGAA
GACATCTTCA TTCCGTTGCA AGTGCGCGTA GCAAAAGCCC AAAAACAGCG TGCTGACCTG
TTTGTCTCTA TCCATGCCGA CGCCTTTACC AGTCGTCAGC CGAGCGGTTC CTCTGTGTTT
GCGCTCTCAA CCAAAGGTGC AACCAGTACT GCGGCAAAAT ATCTGGCACA AACCCAGAAC
GCCTCGGACT TGATTGGTGG CGTGAGCAAA AGCGGTGACC GCTATGTCGA CCACACCATG
TTCGATATGG TGCAGTCGCT GACCATTGCC GACAGCCTGA AGTTTGGTAA AGCGGTACTG
AATAAGCTCG GTAAAATCAA CAAGCTGCAT AAAAATCAAG TTGAACAGGC CGGGTTTGCC
GTACTAAAGG CACCAGATAT TCCCTCCATT CTGGTCGAAA CGGCGTTTAT CAGTAACGTT
GAGGAAGAGC GTAAACTGAA AACGGCGACT TTCCAGCAGG AAGTTGCGGA GTCTATTCTT
GCGGGGATTA AAGCGTATTT TGCCGATGGG GCGACGCTGG CGAGAAGGGG ATGA
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| Protein sequence | MSGSNTAISR RRLLQGAGAM WLLSVSQVSL AAVSQVVAVR VWPASSYTRV TVESNRQLKY
KQFALSNPER VVVDIEDVNL NSVLKGMAAQ IRADDPFIKS ARVGQFDPQT VRMVFELKQN
VKPQLFALAP VAGFKERLVM DLYPANAQDM QDPLLALLED YNKGDLEKQV PPAQSGPQPG
KAGRDRPIVI MLDPGHGGED SGAVGKYKTR EKDVVLQIAR RLRSLIEKEG NMKVYMTRNE
DIFIPLQVRV AKAQKQRADL FVSIHADAFT SRQPSGSSVF ALSTKGATST AAKYLAQTQN
ASDLIGGVSK SGDRYVDHTM FDMVQSLTIA DSLKFGKAVL NKLGKINKLH KNQVEQAGFA
VLKAPDIPSI LVETAFISNV EEERKLKTAT FQQEVAESIL AGIKAYFADG ATLARRG
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