Gene SbBS512_E3045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3045 
SymbolamiC 
ID6269859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2849428 
End bp2850681 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content54% 
IMG OID641726978 
ProductN-acetylmuramoyl-L-alanine amidase AmiC 
Protein accessionYP_001881442 
Protein GI187730180 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGGAT CCAACACTGC AATCAGCCGT CGTCGTTTAC TGCAAGGCGC GGGTGCCATG 
TGGCTATTGA GCGTAAGTCA GGTCAGTCTG GCTGCGGTCA GCCAGGTCGT GGCGGTGCGC
GTCTGGCCTG CGTCCAGCTA CACCCGTGTG ACGGTAGAAT CAAATCGTCA GCTGAAATAT
AAGCAGTTCG CGTTGAGTAA CCCTGAACGC GTGGTGGTGG ATATCGAAGA TGTAAACCTG
AACTCGGTAC TCAAGGGGAT GGCGGCACAA ATTCGTGCAG ACGACCCGTT CATCAAGTCG
GCGCGCGTCG GGCAATTTGA CCCGCAGACC GTACGGATGG TTTTTGAATT AAAGCAAAAC
GTAAAACCGC AGCTGTTTGC CCTTGCGCCG GTCGCCGGGT TTAAAGAGCG TCTGGTGATG
GACCTCTATC CGGCCAATGC ACAGGATATG CAGGACCCGC TGCTGGCGCT GCTGGAGGAT
TACAACAAAG GCGACCTCGA AAAGCAGGTG CCGCCAGCAC AAAGTGGTCC ACAACCGGGT
AAAGCAGGGC GCGATCGTCC TATTGTTATT ATGCTTGACC CTGGCCACGG CGGCGAAGAC
TCCGGTGCGG TGGGGAAATA CAAAACGCGC GAAAAAGACG TGGTATTGCA AATAGCTCGC
CGTCTGCGCT CTCTGATCGA GAAAGAGGGC AATATGAAGG TGTACATGAC GCGCAATGAA
GACATCTTCA TTCCGTTGCA AGTGCGCGTA GCAAAAGCCC AAAAACAGCG TGCTGACCTG
TTTGTCTCTA TCCATGCCGA CGCCTTTACC AGTCGTCAGC CGAGCGGTTC CTCTGTGTTT
GCGCTCTCAA CCAAAGGTGC AACCAGTACT GCGGCAAAAT ATCTGGCACA AACCCAGAAC
GCCTCGGACT TGATTGGTGG CGTGAGCAAA AGCGGTGACC GCTATGTCGA CCACACCATG
TTCGATATGG TGCAGTCGCT GACCATTGCC GACAGCCTGA AGTTTGGTAA AGCGGTACTG
AATAAGCTCG GTAAAATCAA CAAGCTGCAT AAAAATCAAG TTGAACAGGC CGGGTTTGCC
GTACTAAAGG CACCAGATAT TCCCTCCATT CTGGTCGAAA CGGCGTTTAT CAGTAACGTT
GAGGAAGAGC GTAAACTGAA AACGGCGACT TTCCAGCAGG AAGTTGCGGA GTCTATTCTT
GCGGGGATTA AAGCGTATTT TGCCGATGGG GCGACGCTGG CGAGAAGGGG ATGA
 
Protein sequence
MSGSNTAISR RRLLQGAGAM WLLSVSQVSL AAVSQVVAVR VWPASSYTRV TVESNRQLKY 
KQFALSNPER VVVDIEDVNL NSVLKGMAAQ IRADDPFIKS ARVGQFDPQT VRMVFELKQN
VKPQLFALAP VAGFKERLVM DLYPANAQDM QDPLLALLED YNKGDLEKQV PPAQSGPQPG
KAGRDRPIVI MLDPGHGGED SGAVGKYKTR EKDVVLQIAR RLRSLIEKEG NMKVYMTRNE
DIFIPLQVRV AKAQKQRADL FVSIHADAFT SRQPSGSSVF ALSTKGATST AAKYLAQTQN
ASDLIGGVSK SGDRYVDHTM FDMVQSLTIA DSLKFGKAVL NKLGKINKLH KNQVEQAGFA
VLKAPDIPSI LVETAFISNV EEERKLKTAT FQQEVAESIL AGIKAYFADG ATLARRG