| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E3020 |
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| Symbol | kduD |
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| ID | 6269573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 2815451 |
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| End bp | 2816137 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641726952 |
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| Product | 2-deoxy-D-gluconate 3-dehydrogenase |
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| Protein accession | YP_001881417 |
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| Protein GI | 187730969 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | [TIGR01832] 2-deoxy-D-gluconate 3-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTTGG GGCTGGCGCA AGCGGGCTGT GACATTGTTG GCATTAACAT CGTTGAACCG
ACTGAAACCA TCGAGCAGGT CACGGCGCTG GGGCGTCGTT TTTTAAGCCT GACCGCCGAT
CTGCGAAAGA TTGATGGCAT TCCTGGACTG CTGGATCGCG CGGTAGCTGA ATTTGGTCAT
ATTGATATCC TGGTGAATAA CGCCGGATTG ATTCGCCGCG AAGACGCTCT CGAGTTCAGC
GAAAAAGACT GGGACGATGT CATGAACCTG AATATCAAGA GCGTATTCTT CATGTCTCAG
GCAGCGGCGA AACACTTTAT CGCGCAAGGC AATGGCGGCA AGATTATCAA TATCGCGTCA
ATGCTCTCCT TCCAGGGCGG GATCCGTGTG CCTTCTTATA CCGCATCAAA AAGCGGCGTG
ATGGGTGTGA CGCGATTGAT GGCGAACGAA TGGGCTAAAC ACAACATTAA TGTTAATGCG
ATAGCTCCGG GTTACATGGC GACCAACAAT ACTCAACAAC TACGGGCAGA TGAACAACGT
AGCGCGGAAA TTCTCGACCG CATTCCAGCT GGTCGTTGGG GACTGCCGAG TGACCTGATG
GGGCCGATAG TGTTCCTTGC CTCCAGCGCT TCAGATTATG TGAATGGTTA TACCATTGCC
GTGGATGGCG GTTGGCTGGC GCGTTAA
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| Protein sequence | MALGLAQAGC DIVGINIVEP TETIEQVTAL GRRFLSLTAD LRKIDGIPGL LDRAVAEFGH
IDILVNNAGL IRREDALEFS EKDWDDVMNL NIKSVFFMSQ AAAKHFIAQG NGGKIINIAS
MLSFQGGIRV PSYTASKSGV MGVTRLMANE WAKHNINVNA IAPGYMATNN TQQLRADEQR
SAEILDRIPA GRWGLPSDLM GPIVFLASSA SDYVNGYTIA VDGGWLAR
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