Gene SbBS512_E3016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3016 
Symbol 
ID6268487 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2811802 
End bp2812983 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content53% 
IMG OID641726949 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_001881414 
Protein GI187732251 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGACG TTGTGATTGT CGGGGCGTTA CGGACACCTA TCGGCTGCTT TCGTGGTGCG 
TTAGCGGGTC ATTCCGCCGT GGAACTTGGT AGTTTGGTCG TGAAAGCGTT AATAGAACGT
ACCGGCGTTC CTGCATATGC GGTGGATGAA GTAATTCTTG GTCAGGTGTT GACTGCAGGG
GCAGGGCAGA ATCCGGCAAG GCAATCGGCT ATTAAAGGTG GTCTTCCTAA TAGCGTTTCT
GCAATCACTA TTAATGACGT TTGCGGTTCT GGGCTTAAAG CACTGCATCT GGCTACTCAG
GCGATACAGT GTGGCGAGGC TGATATTGTC ATCGCCGGTG GCCAGGAAAA CATGAGCCGC
GCACCACATG TTCTGACTGA TAGCCGCACC GGTGCACAGC TTGGCAATAG CCAGTTGGTT
GACAGTCTGG TGCATGATGG GTTGTGGGAT GCCTTCAATG ATTATCATAT TGGTGTCACC
GCCGAAAATC TGGCTCGCGA ATATGGCATC AGCCGTCAGT TGCAGGATGC TTACGCACTT
AGCTCGCAAC AAAAAGCGCG AGCGGCGATT GACGCCGGAC GATTTAAAGA TGAGATCGTC
CCGGTAATGA TCCAAAGTAA CGGTCAGACG TTGGTTGTTG ATACCGATGA ACAGCCATGC
ACTGACGCCA GTGCAGAAGG TTTAGCCCGT TTAAATCCTT CATTTGATAG TCTCGGTTCT
GTGACCGCGG GGAATGCATC ATCCATAAAC GATGGCGCAG CTGCGGTAAT GATGATGAGC
GAAGCCAAAG CACGAGCGTT GAATTTACCC GTGCTGGCCC GCATCCGCGC ATTTGCCAGC
GTTGGTGTAG ATCCGGCATT GATGGGAATT GCGCCGGTGT ATGCGACCCG CCGTTGCCTG
GAGCGTGTAG GCTGGCAGTT GGCTGATGTC GATCTTATCG AGGCTAATGA AGCGTTTGCT
GCACAGGCGC TTTCGGTTGG CAAGATGCTT GAGTGGGATG AGCGTCGGGT CAATGTCAAT
GGTGGCGCGA TCGCACTCGG TCACCCGATA GGCGCTTCCG GTTGCCGAAT CCTGGTTTCT
CTGGTTCATG AAATGGTGAA ACGTAATGCC CGCAAAGGGC TGGCAACGCT TTGTATCGGC
GGGGGCCAGG GCGTGGCATT GACCATTGAA CGTGACGAGT AG
 
Protein sequence
MKDVVIVGAL RTPIGCFRGA LAGHSAVELG SLVVKALIER TGVPAYAVDE VILGQVLTAG 
AGQNPARQSA IKGGLPNSVS AITINDVCGS GLKALHLATQ AIQCGEADIV IAGGQENMSR
APHVLTDSRT GAQLGNSQLV DSLVHDGLWD AFNDYHIGVT AENLAREYGI SRQLQDAYAL
SSQQKARAAI DAGRFKDEIV PVMIQSNGQT LVVDTDEQPC TDASAEGLAR LNPSFDSLGS
VTAGNASSIN DGAAAVMMMS EAKARALNLP VLARIRAFAS VGVDPALMGI APVYATRRCL
ERVGWQLADV DLIEANEAFA AQALSVGKML EWDERRVNVN GGAIALGHPI GASGCRILVS
LVHEMVKRNA RKGLATLCIG GGQGVALTIE RDE