Gene SbBS512_E3009 details

Gene Information

• Locus tag: SbBS512_E3009
• Symbol: smpB
• ID: 6269509
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: +
• Start bp: 2805768
• End bp: 2806250
• Gene Length: 483 bp
• Protein Length: 160 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 641726945
• Product: SsrA-binding protein
• Protein accession: YP_001881410
• Protein GI: 187732010
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 0.0117126
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGAAGA AAAAAGCACA TAAACCTGGT TCAGCGACCA TCGCGCTTAA CAAGCGCGCC 
CGTCACGAAT ACTTTATCGA AGAAGAGTTC GAAGCGGGAC TTGCCCTGCA AGGCTGGGAA 
GTTAAATCCC TGCGCGCAGG AAAAGCCAAT ATCAGCGACA GCTACGTCCT TCTGCGTGAC 
GGAGAGGCAT TTCTGTTTGG CGCTAACATC ACGCCAATGG CCGTAGCCTC CACGCATGTG 
GTGTGCGATC CTACCCGTAC CCGCAAGTTA CTTCTCAACC AGCGCGAACT GGACTCATTG 
TACGGTCGCG TCAATCGAGA AGGCTATACC GTAGTGGCGC TCTCCCTGTA CTGGAAAAAT 
GCCTGGTGCA AAGTGAAAAT CGGCGTCGCC AAAGGTAAAA AACAGCACGA TAAACGTTCA 
GATATCAAAG AACGCGAATG GCAGGTGGAT AAAGCACGTA TCATGAAAAA CGCCCACCGT 
TAA 

 

Protein sequence

MTKKKAHKPG SATIALNKRA RHEYFIEEEF EAGLALQGWE VKSLRAGKAN ISDSYVLLRD 
GEAFLFGANI TPMAVASTHV VCDPTRTRKL LLNQRELDSL YGRVNREGYT VVALSLYWKN 
AWCKVKIGVA KGKKQHDKRS DIKEREWQVD KARIMKNAHR