Gene SbBS512_E3008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E3008 
Symbol 
ID6271031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2805160 
End bp2805597 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content49% 
IMG OID641726944 
Producthypothetical protein 
Protein accessionYP_001881409 
Protein GI187733772 
COG category[I] Lipid transport and metabolism 
COG ID[COG2867] Oligoketide cyclase/lipid transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.00761479 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTCAGA TTAGCCGGAC CGCACTGGTA CCCTACAGCG CGGAGCAAAT GTATCAGTTA 
GTGAATGACG TTCAGTCTTA TCCTCAGTTT TTGCCGGGTT GTACCGGAAG TCGGATTCTG
GAGTCCACTC CTGGGCAGAT GACTGCGGCG GTAGATGTCT CTAAGGCTGG GATCAGCAAA
ACGTTTACTA CCCGCAACCA GTTGACCAGT AACCAAAGTA TTCTTATGAA TCTGGTGGAT
GGGCCGTTCA AGAAATTGAT TGGTGGATGG AAGTTTACGC CGCTGAGCCA GGAGGCGTGT
CGTATCGAGT TTCATCTCGA CTTTGAGTTT ACCAATAAGT TGATTGAACT CGCCTTTGGT
CGCGTGTTTA AAGAGCTGGC GTCTAATATG GTCCAGGCTT TTACGGTTCG TGCGAAAGAG
GTTTACAGTG CCAGGTAA
 
Protein sequence
MPQISRTALV PYSAEQMYQL VNDVQSYPQF LPGCTGSRIL ESTPGQMTAA VDVSKAGISK 
TFTTRNQLTS NQSILMNLVD GPFKKLIGGW KFTPLSQEAC RIEFHLDFEF TNKLIELAFG
RVFKELASNM VQAFTVRAKE VYSAR