| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2973 |
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| Symbol | clpB |
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| ID | 6269913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2778072 |
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| End bp | 2780645 |
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| Gene Length | 2574 bp |
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| Protein Length | 857 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641726915 |
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| Product | protein disaggregation chaperone |
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| Protein accession | YP_001881380 |
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| Protein GI | 187733901 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000000839096 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGTCTCG ATCGTCTTAC TAATAAATTC CAGCTTGCTC TTGCCGATGC CCAATCACTT
GCACTCGGGC ACGACAACCA ATTCATCGAA CCACTTCATT TAATGAGCGC CCTGCTGAAT
CAGGAAGGGG GTTCGGTTAG TCCTTTATTA ACATCCGCTG GCATAAATGC TGGCCAGTTG
CGCACAGATA TCAATCAGGC ATTAAATCGT TTACCGCAGG TTGAAGGTAC TGGTGGTGAT
GTCCAGCCAT CACAGGATCT GGTGCGCGTT CTTAATCTTT GCGACAAGCT GGCGCAAAAA
CGAGGTGATA ACTTTATCTC GTCAGAACTG TTCGTTCTGG CGGCACTTGA GTCTCGCGGC
ACGCTGGCCG ACATCCTGAA AGCAGCAGGG GCGACCACCG CCAACATTAC TCAAGCGATT
GAACAAATGC GTGGAGGTGA AAGCGTGAAC GATCAAGGTG CTGAAGACCA ACGTCAGGCT
TTGAAAAAAT ATACCATCGA CCTTACCGAA CGAGCCGAAC AGGGCAAACT CGATCCGGTG
ATTGGTCGTG ATGAAGAAAT TCGCCGTACC ATTCAGGTGC TGCAACGTCG TACTAAAAAT
AACCCGGTAC TGATTGGTGA ACCCGGCGTC GGTAAAACTG CCATCGTTGA AGGTCTGGCG
CAGCGTATTA TCAACGGCGA AGTGCCGGAA GGATTGAAAG GCCGCCGCGT ACTGGCGCTG
GATATGGGCG CGCTGGTGGC TGGGGCGAAA TATCGCGGTG AGTTTGAAGA ACGTTTAAAA
GGCGTGCTTA ACGATCTTGC CAAACAGGAA GGCAACGTCA TCCTGTTTAT CGACGAATTA
CATACCATGG TCGGCGCGGG TAAAGCCGAT GGCGCAATGG ACGCCGGAAA CATGCTGAAA
CCGGCGCTGG CGCGTGGTGA ATTGCACTGC GTAGGTGCCA CGACGCTTGA CGAATATCGC
CAGTACATCG AAAAAGATGC TGCGCTGGAA CGTCGTTTCC AGAAAGTGTT TGTTGCCGAG
CCTTCTGTTG AAGATACCAT TGCGATTCTG CGTGGCCTGA AAGAACGTTA CGAATTGCAC
CACCATGTGC AAATTACTGA CCCGGCAATT GTTGCAGCAG CGACGTTGTC TCATCGCTAC
ATTGCTGACC GTCAGCTGCC GGATAAAGCC ATCGACCTGA TCGATGAAGC AGCATCCAGC
ATTCGTATGC AGATTGACTC AAAACCAGAA GAACTCGACC GACTCGATCG TCGTATCATC
CAGCTCAAAC TGGAACAACA GGCGTTAATG AAAGAGTCTG ATGAAGCCAG TAAAAAACGC
CTGGATATGC TCAACGAAGA ACTGAGCGAC AAAGAACGTC AGTACTCCGA GTTAGAAGAA
GAGTGGAAAG CAGAGAAGGC ATCGCTTTCT GGTACGCAGA CCATTAAAGC GGAACTGGAA
CAGGCGAAAA TCGCTATTGA ACAGGCTCGC CGTGTGGGGG ACCTGGCGCG GATGTCTGAA
CTGCAATACG GCAAAATCCC GGAACTGGAA AAGCAACTGG AAGCCGCAAC GCAGCTCGAA
GGCAAAACTA TGCGTCTGTT GCGTAATAAA GTGACCGACG CCGAAATTGC TGAAGTGCTG
GCGCGTTGGA CGGGGATTCC GGTTTCTCGC ATGATGGAAA GCGAGCGCGA AAAACTGCTG
CGTATGGAGC AAGAACTGCA CCATCGCGTC ATTGGTCAGA ACGAAGCGGT TGATGCGGTA
TCTAACGCTA TTCGCCGTAG CCGTGCGGGG TTGGCGGATC CAAATCGCCC GATTGGTTCA
TTCCTGTTCC TCGGCCCAAC GGGTGTGGGG AAAACTGAGC TTTGTAAGGC GCTGGCGAAC
TTTATGTTTG ATAGCGACGA GGCGATGGTC CGTATCGATA TGTCCGAGTT TATGGAGAAA
CACTCGGTGT CTCGTCTGGT TGGTGCGCCT CCGGGATATG TCGGTTATGA AGAAGGTGGC
TACCTGACCG AAGCTGTGCG TCGTCGTCCG TATTCCGTCA TCCTGCTGGA TGAAGTGGAA
AAAGCGCATC CGGATGTCTT CAACATTCTG TTGCAGGTAC TGGATGATGG TCGTCTGACT
GACGGGCAGG GGAGAACGGT CGACTTCCGT AATACGGTTG TCATTATGAC CTCTAACCTC
GGTTCCGATT TGATTCAGGA ACGCTTCGGT GAACTGGATT ATGCGCACAT GAAAGAGCTG
GTGCTCGGTG TGGTAAGCCA TAACTTCCGT CCGGAATTCA TTAACCGTAT TGATGAAGTG
GTGGTCTTCC ATCCGCTGGG TGAACAGCAC ATTGCCTCGA TTGCGCAGAT TCAGTTGAAA
CGTCTGTACA AACGTCTGGA AGAACGTGGT TATGAAATCT ACATTTCTGA CGAGGCGCTG
AAACTGCTGA GCGAGAACGG TTACGATCCA GTCTATGGTG CACGTCCTTT GAAACGTGCT
ATCCAGCAGC AGATCGAAAA CCCGCTGGCA CAGCAAATAC TGTCTGGTGA ATTGGTTCCG
GGTAAAGTGA TTCGCCTGGA AGTTAATGAA GACCGGATTG TCGCTGTCCA GTAA
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| Protein sequence | MRLDRLTNKF QLALADAQSL ALGHDNQFIE PLHLMSALLN QEGGSVSPLL TSAGINAGQL
RTDINQALNR LPQVEGTGGD VQPSQDLVRV LNLCDKLAQK RGDNFISSEL FVLAALESRG
TLADILKAAG ATTANITQAI EQMRGGESVN DQGAEDQRQA LKKYTIDLTE RAEQGKLDPV
IGRDEEIRRT IQVLQRRTKN NPVLIGEPGV GKTAIVEGLA QRIINGEVPE GLKGRRVLAL
DMGALVAGAK YRGEFEERLK GVLNDLAKQE GNVILFIDEL HTMVGAGKAD GAMDAGNMLK
PALARGELHC VGATTLDEYR QYIEKDAALE RRFQKVFVAE PSVEDTIAIL RGLKERYELH
HHVQITDPAI VAAATLSHRY IADRQLPDKA IDLIDEAASS IRMQIDSKPE ELDRLDRRII
QLKLEQQALM KESDEASKKR LDMLNEELSD KERQYSELEE EWKAEKASLS GTQTIKAELE
QAKIAIEQAR RVGDLARMSE LQYGKIPELE KQLEAATQLE GKTMRLLRNK VTDAEIAEVL
ARWTGIPVSR MMESEREKLL RMEQELHHRV IGQNEAVDAV SNAIRRSRAG LADPNRPIGS
FLFLGPTGVG KTELCKALAN FMFDSDEAMV RIDMSEFMEK HSVSRLVGAP PGYVGYEEGG
YLTEAVRRRP YSVILLDEVE KAHPDVFNIL LQVLDDGRLT DGQGRTVDFR NTVVIMTSNL
GSDLIQERFG ELDYAHMKEL VLGVVSHNFR PEFINRIDEV VVFHPLGEQH IASIAQIQLK
RLYKRLEERG YEIYISDEAL KLLSENGYDP VYGARPLKRA IQQQIENPLA QQILSGELVP
GKVIRLEVNE DRIVAVQ
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