Gene SbBS512_E2932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2932 
Symbolrnc 
ID6272983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand- 
Start bp2738496 
End bp2739176 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content51% 
IMG OID641726877 
Productribonuclease III 
Protein accessionYP_001881346 
Protein GI187732795 
COG category[K] Transcription 
COG ID[COG0571] dsRNA-specific ribonuclease 
TIGRFAM ID[TIGR02191] ribonuclease III, bacterial 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.223981 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCCA TCGTAATTAA TCGGCTTCAA CGGAAGCTGG GCTACACTTT TAATCATCAG 
GAACTGTTGC AGCAGGCATT AACTCATCGT AGTGCCAGCA GCAAACATAA CGAGCGTTTA 
GAATTTTTAG GCGACTCTAT TCTGAGCTAC GTTATCGCCA ATGCGCTTTA TCACCGTTTC 
CCTCGTGTGG ATGAAGGCGA TATGAGCCGG ATGCGCGCCA CGCTGGTCCG TGGCAATACG 
CTGGCGGAAC TGGCGCGCGA ATTTGAGTTA GGCGAGTGCT TACGTTTAGG GCCAGGTGAA 
CTTAAAAGCG GTGGATTTCG TCGTGAGTCA ATTCTCGCCG ATACCGTCGA AGCATTAATT 
GGTGGCGTAT TCCTCGACAG TGATATTCAA ACCGTCGAGA AATTAATCCT CAACTGGTAT 
CAAACTCGTT TGGACGAAAT TAGCCCAGGC GATAAACAAA AAGATCCGAA AACGCGCTTG 
CAAGAATATT TGCAGGGTCG CCATCTGCCG CTGCCGACTT ATCTGGTAGT CCAGGTACGT 
GGCGAAGCGC ACGATCAGGA ATTTACTATC CACTGCCAGG TCAGCGGCCT GAGTGAACCG 
GTGGTTGGCA CAGGTTCAAG CCGTCGTAAG GCTGAGCAGG CTGCCGCCGA ACAGGCGTTG 
AAAAAACTGG AGCTGGAATG A
 
Protein sequence
MNPIVINRLQ RKLGYTFNHQ ELLQQALTHR SASSKHNERL EFLGDSILSY VIANALYHRF 
PRVDEGDMSR MRATLVRGNT LAELAREFEL GECLRLGPGE LKSGGFRRES ILADTVEALI 
GGVFLDSDIQ TVEKLILNWY QTRLDEISPG DKQKDPKTRL QEYLQGRHLP LPTYLVVQVR 
GEAHDQEFTI HCQVSGLSEP VVGTGSSRRK AEQAAAEQAL KKLELE