Gene SbBS512_E2907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2907 
Symbol 
ID6273021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2711522 
End bp2712262 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content55% 
IMG OID641726852 
ProductRNA methyltransferase, TrmH family, group 1 
Protein accessionYP_001881323 
Protein GI187732283 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0565] rRNA methylase 
TIGRFAM ID[TIGR00050] RNA methyltransferase, TrmH family, group 1 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.000722285 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGCAAA ATATTCGAAT TGTGCTGGTG GAGACGTCAC ACACCGGCAA TATGGGTTCT 
GTTGCCCGTG CCATGAAAAC AATGGGATTA ACCAATCTGT GGCTGGTTAA TCCACTGGTG
AAACCCGACT CCCAGGCGAT TGCCCTGGCA GCAGGGGCCA GCGATGTGAT TGGTAATGCT
CACATCGTCG ATACGCTCGA CGAAGCGTTA GCCGGTTGTA GCTTGGTGGT GGGCACCAGC
GCACGTTCCC GCACGCTGCC ATGGCCGATG CTCGACCCGC GCGAATGCGG CCTGAAAAGC
GTCGCTGAAG CGGCAAATAC CCCGGTGGCG CTGGTGTTTG GTCGCGAGCG CGTCGGCTTG
ACCAATGAAG AGTTGCAGAA ATGCCATTAT CATGTCGCGA TTGCGGCTAA CCCGGAATAC
AGCTCGCTGA ACCTGGCGAT GGCGGTTCAG GTTATTGCCT ATGAAGTGCG CATGGCCTGG
CTGGCAACTC AGGAAAACGG CGAGCAGGTC GAGCATGAAG AGACGCCGTA TCCGCTGGTC
GATGATCTGG AGCGTTTTTA TGGTCATCTG GAACAAACGC TGCTGGCAAC CGGTTTTATC
CGTGAAAACC ATCCGGGGCA GGTGATGAAT AAATTGCGCC GTCTGTTTAC CCGTGCGCGC
CCGGAAAGCC AGGAATTGAA TATCCTGCGC GGGATTCTGG CTTCTATTGA GCAGCAGAAT
AAAGGTAACA AGGCCGAATA A
 
Protein sequence
MLQNIRIVLV ETSHTGNMGS VARAMKTMGL TNLWLVNPLV KPDSQAIALA AGASDVIGNA 
HIVDTLDEAL AGCSLVVGTS ARSRTLPWPM LDPRECGLKS VAEAANTPVA LVFGRERVGL
TNEELQKCHY HVAIAANPEY SSLNLAMAVQ VIAYEVRMAW LATQENGEQV EHEETPYPLV
DDLERFYGHL EQTLLATGFI RENHPGQVMN KLRRLFTRAR PESQELNILR GILASIEQQN
KGNKAE