Gene SbBS512_E2906 details

Gene Information

• Locus tag: SbBS512_E2906
• Symbol: iscR
• ID: 6268892
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 2710764
• End bp: 2711252
• Gene Length: 489 bp
• Protein Length: 162 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 641726851
• Product: DNA-binding transcriptional regulator IscR
• Protein accession: YP_001881322
• Protein GI: 187732827
• COG category: [K] Transcription
• COG ID: [COG1959] Predicted transcriptional regulator
• TIGRFAM ID: [TIGR00738] rrf2 family protein (putative transcriptional regulator); [TIGR02010] iron-sulfur cluster assembly transcription factor IscR

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.00148392
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGACTGA CATCTAAAGG GCGCTATGCC GTGACCGCAA TGCTTGACGT TGCGCTCAAC 
TCTGAAGCGG GCCCGGTACC GTTGGCTGAT ATTTCCGAAC GTCAGGGAAT TTCCCTTTCT 
TATCTGGAAC AACTGTTTTC CCGTCTGCGT AAAAATGGTC TGGTTTCCAG CGTACGTGGA 
CCAGGCGGTG GTTATCTGTT AGGCAAAGAT GCCAGCAGCA TCGCCGTTGG CGAAGTGATT 
AGCGCCGTTG ACGAATCTGT AGATGCCACC CGTTGTCAGG GTAAAGGCGG CTGCCAGGGC 
GGCGATAAAT GCCTGACCCA CGCGCTGTGG CGTGATTTGA GCGACCGTCT CACCGGTTTT 
CTCAACAACA TTACTTTAGG CGAACTGGTT AATAACCAGG AAGTGCTGGA TGTGTCTGGT 
CGTCAGCATA CTCACGACGC GCCACGCACC CGCACACAAG ACGCGATCGA CGTTAAGTTA 
CGCGCTTAA 

 

Protein sequence

MRLTSKGRYA VTAMLDVALN SEAGPVPLAD ISERQGISLS YLEQLFSRLR KNGLVSSVRG 
PGGGYLLGKD ASSIAVGEVI SAVDESVDAT RCQGKGGCQG GDKCLTHALW RDLSDRLTGF 
LNNITLGELV NNQEVLDVSG RQHTHDAPRT RTQDAIDVKL RA