Gene SbBS512_E2872 details

Gene Information

• Locus tag: SbBS512_E2872
• Symbol: upp
• ID: 6270954
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 2669971
• End bp: 2670597
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641726816
• Product: uracil phosphoribosyltransferase
• Protein accession: YP_001881289
• Protein GI: 187730410
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0035] Uracil phosphoribosyltransferase
• TIGRFAM ID: [TIGR01091] uracil phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 38
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATCG TGGAAGTCAA ACACCCACTC GTCAAACACA AGCTGGGACT GATGCGTGAG 
CAAGATATCA GCACCAAGCG CTTTCGCGAA CTCGCTTCCG AAGTGGGTAG CCTGCTGACT 
TACGAAGCGA CCGCCGACCT CGAAACGGAA AAAGTAACTA TCGAAGGCTG GAACGGCCCG 
GTAGAAATCG ACCAGATCAA AGGTAAGAAA ATTACCGTTG TGCCAATTCT GCGTGCGGGT 
CTTGGTATGA TGGACGGTGT GCTGGAAAAT GTTCCGAGCG CGCGCATCAG CGTTGTCGGT 
ATGTACCGTA ATGAAGAAAC GCTGGAGCCG GTACCGTACT TCCAGAAACT GGTTTCTAAC 
ATCGATGAGC GTATGGCGCT GATCGTTGAC CCAATGCTGG CAACCGGTGG TTCCGTTATC 
GCGACCATCG ACCTGCTGAA AAAAGCGGGC TGCAGCAGCA TCAAAGTTCT GGTGCTGGTC 
GCTGCGCCAG AAGGTATCGC TGCGCTGGAA AAAGCGCACC CGGACGTCGA ACTGTATACC 
GCATCGATTG ATCAGGGACT GAACGAGCAC GGATACATTA TTCCGGGCCT CGGCGATGCC 
GGTGACAAAA TCTTTGGTAC GAAATAA 

 

Protein sequence

MKIVEVKHPL VKHKLGLMRE QDISTKRFRE LASEVGSLLT YEATADLETE KVTIEGWNGP 
VEIDQIKGKK ITVVPILRAG LGMMDGVLEN VPSARISVVG MYRNEETLEP VPYFQKLVSN 
IDERMALIVD PMLATGGSVI ATIDLLKKAG CSSIKVLVLV AAPEGIAALE KAHPDVELYT 
ASIDQGLNEH GYIIPGLGDA GDKIFGTK