| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2867 |
|---|
| Symbol | |
|---|
| ID | 6271900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 2664545 |
|---|
| End bp | 2665606 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641726811 |
|---|
| Product | putative permease, PerM family |
|---|
| Protein accession | YP_001881284 |
|---|
| Protein GI | 187731235 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 0.697689 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGAAA TGTTGATGCA ATGGTATCGC CGCCGTTTTA GCGACCCGGA AGCGATTGCC
TTGCTGGTTA TTTTAGTTGC CGGATTTGGC ATTATCTTTT TCTTTAGTGG CCTGCTTGCT
CCGTTGCTGG TGGCTATTGT GCTGGCCTAT TTGCTGGAAT GGCCAACCGT GCGCCTGCAA
TCTATTGGCT GCTCCCGCCG CTGGGCGACG TCGATTGTAT TGGTGGTTTT TGTCGGTATA
TTGCTACTGA TGGCGTTCGT GGTACTGCCT ATCGCCTGGC AACAGGGCAT CTACTTAATC
CGCGATATGC CGGGGATGCT CAATAAGCTT TCTGACTTTG CCGCCACGTT GCCGCGCCGC
TATCCGGCGT TAATGGACGC GGGCATTATT GATGCAATGG CCGAAAATAT GCGCAGTCGG
ATGCTGACCA TGGGCGATTC GGTGGTGAAA ATTTCCCTCG CCTCGCTGGT CGGTTTGCTG
ACCATTGCCG TCTATCTGGT GCTGGTGCCA TTGATGGTCT TCTTCCTGCT GAAAGACAAA
GAGCAGATGC TGAACGCCGT TCGTCGGGTG CTGCCGCGCA ACCGTGGACT GGCAGGACAG
GTGTGGAAGG AGATGAATCA ACAAATCACC AACTATATCC GCGGCAAAGT GCTGGAGATG
ATCGTGGTGG GGATCGCCAC CTGGCTGGGG TTCTTGCTCT TTGGGCTGAA CTATTCGCTG
CTGCTGGCGG TGCTGGTCGG CTTCTCGGTT CTTATTCCGT ACATTGGCGC ATTTGTGGTG
ACCATTCCGG TGGTTGGCGT GGCGCTATTC CAGTTTGGCG CAGGCACGGA ATTCTGGAGC
TGCTTCGCGG TGTATCTGAT TATTCAGGCG CTGGACGGCA ACCTGCTAGT ACCGGTGTTG
TTCTCCGAAG CGGTTAACCT GCATCCGCTG GTGATTATTT TATCGGTGGT GATCTTCGGT
GGTTTGTGGG GATTCTGGGG CGTATTCTTC GCCATTCCAT TGGCGACGCT GATCAAAGCC
GTGATCCACG CCTGGCCCGA TGGGCAAATC GCGCAAGAAT AA
|
|---|
| Protein sequence | MLEMLMQWYR RRFSDPEAIA LLVILVAGFG IIFFFSGLLA PLLVAIVLAY LLEWPTVRLQ
SIGCSRRWAT SIVLVVFVGI LLLMAFVVLP IAWQQGIYLI RDMPGMLNKL SDFAATLPRR
YPALMDAGII DAMAENMRSR MLTMGDSVVK ISLASLVGLL TIAVYLVLVP LMVFFLLKDK
EQMLNAVRRV LPRNRGLAGQ VWKEMNQQIT NYIRGKVLEM IVVGIATWLG FLLFGLNYSL
LLAVLVGFSV LIPYIGAFVV TIPVVGVALF QFGAGTEFWS CFAVYLIIQA LDGNLLVPVL
FSEAVNLHPL VIILSVVIFG GLWGFWGVFF AIPLATLIKA VIHAWPDGQI AQE
|
|---|
| |