Gene SbBS512_E2864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2864 
Symbolfnt 
ID6273257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2662209 
End bp2662913 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content50% 
IMG OID641726808 
Productformate/nitrite transporter 
Protein accessionYP_001881281 
Protein GI187732121 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2116] Formate/nitrite family of transporters 
TIGRFAM ID[TIGR00790] formate/nitrite transporter 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.666076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAACA AACTCTCTTT CGACTTGCAG TTGAGCGCCA GAAAAGCGGC AATCGCTGAA 
CGGATTGCCG TCCATAAAAT TGCCCGCAGT AAAGTGTCGG TCTTTTTAAT GGCGATGTCC
GCTGGCGTGT TTATGGCGAT CGGATTTACT TTTTACCTTT CCGTTATCGC CGATGCCCCG
TCTTCACAGG CATTAACCCA TCTGGTGGGC GGCCTTTGCT TTACACTCGG CTTTATTTTG
CTGGCGGTTT GCGGCACCAG CCTGTTCACC TCGTCGGTAA TGACGGTGAT GGCAAAAAGT
CGGGGCGTTA TTAGTTGGCG AACTTGGCTG ATTAACGCAC TTCTGGTGGC CTGTGGTAAT
CTGGCAGGTA TTGCCTGTTT CAGTTTGTTA ATCTGGTTTT CCGGGCTGGT GATGAGTGAA
AACGCGATGT GGGGAGTCGC GGTTTTACAC TGCGCCGAGG GCAAAATGCA TCATACATTT
ACTGAATCTG TCAGCCTCGG CATTATGTGC AATCTGATGG TTTGCCTGGC GCTGTGGATG
AGTTATTGCG GGCGTTCGTT ATGCGACAAA ATCGTCGCCA TGATTTTGCC CATCACCCTG
TTTGTCGCCA GTGGCTTTGA GCACTGTATC GCCAATTTGT TTGTGATTCC GTTCGCCATT
GCCATTCGCC ATTTCGCCCC GTTACTTTAT TCGTACCCCT TATAA
 
Protein sequence
MRNKLSFDLQ LSARKAAIAE RIAVHKIARS KVSVFLMAMS AGVFMAIGFT FYLSVIADAP 
SSQALTHLVG GLCFTLGFIL LAVCGTSLFT SSVMTVMAKS RGVISWRTWL INALLVACGN
LAGIACFSLL IWFSGLVMSE NAMWGVAVLH CAEGKMHHTF TESVSLGIMC NLMVCLALWM
SYCGRSLCDK IVAMILPITL FVASGFEHCI ANLFVIPFAI AIRHFAPLLY SYPL