Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2808 |
Symbol | hemF |
ID | 6270885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2605417 |
End bp | 2606316 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 641726761 |
Product | coproporphyrinogen III oxidase |
Protein accession | YP_001881234 |
Protein GI | 187731800 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0408] Coproporphyrinogen III oxidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 44 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCCG ACGCACACCA GGTTAAACAG TTTCTGCTCA ACCTTCAGGA TACGATTTGT CAGCAGCTGA CCGCCGTCGA TGGCGCAGAA TTTGTCGAAG ATAGTTGGCA GCGCGAAGCT GGCGGCGGCG GGCGTAGTCG GGTGTTGCGT AATGATGGTG TTTTCGAACA GGCAGGCGTC AACTTTTCTC ACGTCCACGG CGAGGCGATG CCTGCTTCCG CCACCGCTCA TCGCCCGGAA CTTGCCGGGC GCAGTTTCGA GGCGATGGGC GTTTCACTGG TAGTGCATCC GCATAACCCG TATGTTCCCA CCAGCCACGC GAATGTGCGT TTTTTTATTG CCGAAAAACC GGGTGCAGAG CCCGTCTGGT GGTTTGGCGG CGGCTTCGAT TTAACCCCTT TCTATGGTTT TGAAGAAGAC GCCATTCACT GGCACCGCAC CGCCCGTGAC CTGTGCCTGC CATTTGGTGA AGACGTTTAT CCCCGTTACA AAAAGTGGTG CGACGATTAC TTCTACCTCA AACATCGCAA CGAACAGCGC GGTATTGGCG GGCTGTTCTT TGATGATCTG AACACGCCAG ATTTCGACCA CTGTTTTGCC TTTATGCAGG CGGTAGGCAA AGGCTACACC GACGCTTATT TACCAATTGT AGAGCGACGT AAAGCGATGG CCTACGGCGA GCGCGAGCGC AATTTTCAGC TCTACCGTCG CGGTCGTTAT GTCGAGTTCA ATCTGGTCTG GGATCGCGGC ACTCTGTTTG GCCTGCAAAC TGGCGGGCGC ACCGAGTCGA TCCTGATGTC AATGCCGCCA CTGGTACGCT GGGAGTATGA TTATCAGCCA AAAGATGGCA GCCCAGAAGC GGCGTTAAGT GAGTTTATTA AGGTCAGGGA TTGGGTGTAA
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Protein sequence | MKPDAHQVKQ FLLNLQDTIC QQLTAVDGAE FVEDSWQREA GGGGRSRVLR NDGVFEQAGV NFSHVHGEAM PASATAHRPE LAGRSFEAMG VSLVVHPHNP YVPTSHANVR FFIAEKPGAE PVWWFGGGFD LTPFYGFEED AIHWHRTARD LCLPFGEDVY PRYKKWCDDY FYLKHRNEQR GIGGLFFDDL NTPDFDHCFA FMQAVGKGYT DAYLPIVERR KAMAYGERER NFQLYRRGRY VEFNLVWDRG TLFGLQTGGR TESILMSMPP LVRWEYDYQP KDGSPEAALS EFIKVRDWV
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