Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2799 |
Symbol | |
ID | 6271949 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2596980 |
End bp | 2597837 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641726753 |
Product | transcriptional regulator, RpiR family |
Protein accession | YP_001881226 |
Protein GI | 187731910 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.576789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGTACC TGACGAAAAT AAGCAATGCG GGGAGTGAAT TCACCGAAAA CGAGCAAAAA ATCGCTGACT TTCTGCAGGC CAACGTGAGT GAGCTGCAAT CCGTTTCTTC ACGGCAGATG GCGAAACAGC TCGGCATTAG CCAGTCGAGC ATAGTGAAAT TTGCCCAAAA ACTCGGCGCG CAAGGATTTA CTGAATTGCG TATGGCGTTA ATAGGCGAAT ACAGTGCCAG CCGGGAGAAA ACGAATACCA CGGCGCTGCA CCTGCACAGT TCGATTACCA GTGATGATTC GCTGGAAGTG ATTGCCCGCA AATTGAATCG CGAAAAAGAG CTGGCGCTGG AGCAAACCTG TGCGTTGTTC GACTACGCGC GGCTGCAAAA AATCATTGAG GTCATCAGTA AAGCACCGTT TATCCAGATA ACGGGCCTGG GCGGATCGGC GCTGGTGGGG CGCGATCTGT CGTTCAAACT GATGAAAATT GGCTATCGCG TGGCCTGCGA AGCCGACACG CACGTACAAG CCACCGTTTC CCAGGCGTTG AAAAAAGGCG ATGTACAAAT CGCTATCTCT TACAGCGGCA GTAAAAAAGA GATTGTCTTG TGCGCAGAAG CGGCACGAAA GCAGGGGGCA ACGGTGATTG CCATTACTTC TCTGGCTGAC TCTCCGCTGC GGCGGCTGGC GCATTTCACG CTCGATACCG TTTCCGGTGA AACCGAATGG CGTAGCTCGT CGATGTCTAC CCGCACGGCG CAAAATTCTG TTACCGATTT ACTGTTTGTT GGTCTTGTGC AACTCAATGA TGTGGCGTCA TTGAAAATGA TTCAGCGCAG CAGTGAGCTA ACACAACGCC TGAAATGA
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Protein sequence | MLYLTKISNA GSEFTENEQK IADFLQANVS ELQSVSSRQM AKQLGISQSS IVKFAQKLGA QGFTELRMAL IGEYSASREK TNTTALHLHS SITSDDSLEV IARKLNREKE LALEQTCALF DYARLQKIIE VISKAPFIQI TGLGGSALVG RDLSFKLMKI GYRVACEADT HVQATVSQAL KKGDVQIAIS YSGSKKEIVL CAEAARKQGA TVIAITSLAD SPLRRLAHFT LDTVSGETEW RSSSMSTRTA QNSVTDLLFV GLVQLNDVAS LKMIQRSSEL TQRLK
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