Gene SbBS512_E2762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_E2762 
Symbol 
ID6273039 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010658 
Strand
Start bp2568992 
End bp2570338 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content54% 
IMG OID641726721 
ProductIS4 transposase 
Protein accessionYP_001881200 
Protein GI187733025 
COG category[L] Replication, recombination and repair 
COG ID[COG3385] FOG: Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0503533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTCCGG ATTTTTTTAT GCACATTGGA CAGGCTCTTG ATCTGGTATC CCGTTACGAT 
TCTCTGCGTA ACCCACTGAC TTCTCTGGGG GATTACCTCG ACCCCGAACT CATCTCTCGT
TGCCTTGCCG AATCAGGTAC TGTAACGCTA CGCAAGCGCC GTCTTCCCCT CGAAATGATG
GTCTGGTGTA TTGTTGGCAT GGCGCTTGAG CGTAAAGAAC CTCTTCACCA GATTGTGAAT
CGCCTGGACA TCATGCTGCC GGGCAATCGC CCCTTCGTTG CCCCCAGTGC CGTTATTCAG
GCCCGCCAGC GCCTGGGAAG TGAGGCTGTC CGCCGCGTGT TCACGAAAAC AGCGCAGCTC
TGGCATAACG CCACGCCGCA TCCGCACTGG TGCGGCCTGA CCCTGCTGGC CATCGATGGT
GTGTTCTGGC GCACACCGGA TACACCAGAG AACGATGCAG CCTTCCCCCG CCAGACACAT
GCCGGGAACC CGGCGCTCTA CCCGCAGGTC AAAATGGTCT GCCAGATGGA ACTGACCAGC
CATCTGCTGA CGGCTGCAGC CTTCGGCACG ATGAAGAACA GCGAAAATGA GCTTGCTGAG
CAACTTATAG AACAAACCGG CGATAACACT CTGACGTTAA TGGATAAAGG TTATTACTCA
CTGGGACTGT TAAATGCCTG GAGCCTGGCG GGAGAACACC GCCACTGGAT GATACCTCTC
AGAAAGGGAG CGCAATATGA AGAGCTCAGA AAACTGGGTA AAGGCGATCA TCTGGTGAAG
CTGAAAACCA GCCCGCAGGC ACGAAAAAAG TGGCCGGGAC TGGGAAATGA AGTGACAGCC
CGCCTGCTGA CCGTGACGCG CAAAGGAAAA GTCTGCCATC TGCTGACGTC GATGACGGAC
GCCATGCGCT TCCCCGGAGG AGAAATGGCG GATCTGTACA GTCATCGCTG GGAAATCGAA
CTGGGATACA GGGAGATAAA ACAGACGATG CAACTGAGCA GGCTGACGCT GAGAAGTAAA
AAGCCGGAGC TTGTGGAGCA AGAGCTGTGG GGTGTCTTAC TGGCTTATAA TCTGGTGAGA
TATCAGATGA TTAAAATGGC GGAACATCTG AAAGGTTACT GGCCGAATCA ACTGAGTTTC
TCAGAATCAT GCGGAATGGT GATGAGAATG CTGATGACAT TGCAGGGCGC TTCACCGGGA
CGTATACCGG AGCTGATGCG CGATCTTGCA AGTATGGGAC AACTTGTGAA ATTACCGACG
AGAAGGGGAA GGGCCTTCCC GAGAGTGGTA AAGGAGAGGC CCTGGAAATA CCCCACAGCC
CCGAAAAAGA GCCAGTCAGT TGCTTAA
 
Protein sequence
MFPDFFMHIG QALDLVSRYD SLRNPLTSLG DYLDPELISR CLAESGTVTL RKRRLPLEMM 
VWCIVGMALE RKEPLHQIVN RLDIMLPGNR PFVAPSAVIQ ARQRLGSEAV RRVFTKTAQL
WHNATPHPHW CGLTLLAIDG VFWRTPDTPE NDAAFPRQTH AGNPALYPQV KMVCQMELTS
HLLTAAAFGT MKNSENELAE QLIEQTGDNT LTLMDKGYYS LGLLNAWSLA GEHRHWMIPL
RKGAQYEELR KLGKGDHLVK LKTSPQARKK WPGLGNEVTA RLLTVTRKGK VCHLLTSMTD
AMRFPGGEMA DLYSHRWEIE LGYREIKQTM QLSRLTLRSK KPELVEQELW GVLLAYNLVR
YQMIKMAEHL KGYWPNQLSF SESCGMVMRM LMTLQGASPG RIPELMRDLA SMGQLVKLPT
RRGRAFPRVV KERPWKYPTA PKKSQSVA