Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2729 |
Symbol | |
ID | 6270311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | - |
Start bp | 2530206 |
End bp | 2530961 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641726691 |
Product | lipoprotein, VacJ family |
Protein accession | YP_001881171 |
Protein GI | 187733921 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2853] Surface lipoprotein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCTTC GCCTGTCGGC GCTTGCTCTG GGAACTACGC TTCTGGTGGG GTGTGCGAGT TCCGGTACAG ATCAGCAAGG GCGTTCTGAC CCGTTAGAAG GGTTCAACCG CACCATGTAC AACTTCAACT TCAATGTATT AGACCCGTAT ATTGTTCGAC CGGTCGCTGT CGCCTGGCGT GATTATGTTC CGCAACCGGC GCGTAACGGT TTGAGCAACT TTACCGGCAA CCTTGAAGAA CCTGCGGTGA TGGTTAACTA CTTCTTGCAG GGCGACCCTT ATCAGGGGAT GGTCCACTTT ACCCGCTTTT TCCTGAACAC CATTTTGGGG ATGGGCGGCT TTATTGATGT TGCAGGGATG GCGAACCCGA AACTGCAACG GACTGAACCT CACCGCTTCG GTAGTACGCT TGGTCATTAT GGCGTGGGTT ATGGGCCTTA CGTTCAGTTA CCGTTCTACG GTAGCTTCAC GCTGCGTGAT GACGGTGGTG ATATGGCGGA TGGTCTTTAC CCGGTTCTTT CCTGGCTGAC CTGGCCGATG TCTGTGGGTA AATGGACGCT TGAAGGGATC GAAACCCGCG CTCAGCTGCT GGATTCCGAT GGTCTGCTGC GTCAGTCGTC CGATCCTTAT ATTATGGTGC GCGAAGCGTA CTTCCAGCGT CATGATTTCA TCGCTAATGG CGGCGAACTC AAACCGCAGG AAAATCCGAA CGCACAAGCG ATTCAGGATG ATTTAAAAGA TATTGATTCT GAATAA
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Protein sequence | MKLRLSALAL GTTLLVGCAS SGTDQQGRSD PLEGFNRTMY NFNFNVLDPY IVRPVAVAWR DYVPQPARNG LSNFTGNLEE PAVMVNYFLQ GDPYQGMVHF TRFFLNTILG MGGFIDVAGM ANPKLQRTEP HRFGSTLGHY GVGYGPYVQL PFYGSFTLRD DGGDMADGLY PVLSWLTWPM SVGKWTLEGI ETRAQLLDSD GLLRQSSDPY IMVREAYFQR HDFIANGGEL KPQENPNAQA IQDDLKDIDS E
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