| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2708 |
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| Symbol | prmB |
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| ID | 6272193 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2508876 |
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| End bp | 2509808 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641726672 |
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| Product | N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase |
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| Protein accession | YP_001881152 |
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| Protein GI | 187731589 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2890] Methylase of polypeptide chain release factors |
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| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03533] protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGATAAAA TTTTCGTTGA TGAAGCAGTA AATGAGCTGC AAACCATTCA GGACATGTTG
CGCTGGTCAG TGAGCCGCTT CAGCGCGGCA AATATCTGGT ACGGTCACGG CACCGATAAC
CCGTGGGATG AAGCCGTACA GCTGGTGTTA CCATCGCTCT ACCTGCCGCT GGATATCCCG
GAAGATATGC GCACCGCGCG TCTGACCTCC AGCGAAAAAC ATCGTATTGT TGAACGCGTG
ATCCGCCGCG TCAACGAGCG CATTCCGGTG GCTTACCTGA CCAACAAAGC CTGGTTCTGC
GGTCATGAAT TTTACGTCGA TGAACGCGTG CTGGTGCCGC GCTCGCCGAT TGGTGAACTG
ATCAACAATA AATTTGCCGG ACTCATCAGC AAACAACCGC AGCATATTTT AGATATGTGT
ACCGGTAGCG GCTGCATCGC CATTGCCTGT GCTTATGCCT TCCCGGATGC AGAAGTCGAC
GCGGTGGATA TCTCTCCCGA CGCGCTGGCG GTTGCTGAAC AGAACATCGA AGAACACGGT
CTGATCCACA ACGTCATTCC GATTCGTTCC GATCTGTTCC GCGACTTGCC GAAAGTGCAG
TACGATCTGA TTGTCACTAA CCCGCCGTAT GTCGACGCGG AAGATATGTC CGACCTGCCA
AACGAATACC GTCACGAGCC GGAACTGGGC CTGGCATCTG GCACCGACGG CCTTAAACTG
ACGCGTCGCA TTCTTGGAAA CGCGGCAGAT TACCTTGCTG ATGATGGCGT GTTGATTTGT
GAAGTCGGCA ACAGCATGGT ACATCTTATG GAACAATATC CGGATGTTCC GTTCACCTGG
CTGGAGTTTG ATAACGGCGG CGATGGTGTG TTTATGCTCA CCAAAGAGCA GCTGCTGGCG
GCCCGTGAAT ATTTCGCGAT TTATAAAGAT TAA
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| Protein sequence | MDKIFVDEAV NELQTIQDML RWSVSRFSAA NIWYGHGTDN PWDEAVQLVL PSLYLPLDIP
EDMRTARLTS SEKHRIVERV IRRVNERIPV AYLTNKAWFC GHEFYVDERV LVPRSPIGEL
INNKFAGLIS KQPQHILDMC TGSGCIAIAC AYAFPDAEVD AVDISPDALA VAEQNIEEHG
LIHNVIPIRS DLFRDLPKVQ YDLIVTNPPY VDAEDMSDLP NEYRHEPELG LASGTDGLKL
TRRILGNAAD YLADDGVLIC EVGNSMVHLM EQYPDVPFTW LEFDNGGDGV FMLTKEQLLA
AREYFAIYKD
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