Gene SbBS512_E2689 details

Gene Information

• Locus tag: SbBS512_E2689
• Symbol: ubiX
• ID: 6268541
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010658
• Strand: -
• Start bp: 2489386
• End bp: 2489955
• Gene Length: 570 bp
• Protein Length: 189 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 641726653
• Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase
• Protein accession: YP_001881133
• Protein GI: 187730399
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase
• TIGRFAM ID: [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases

Plasmid Coverage information

• Num covering plasmid clones: 39
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACGAC TCATTGTAGG CATCAGCGGT GCCAGCGGCG CGATTTATGG CGTGCGCTTA 
TTACAGGTTC TGCGCGATGT CACAGATATC GAAACGCATC TGGTGATGAG CCAGGCGGCG 
CGCCAGACCT TATCCCTCGA AACGGATTTT TCCCTGCGCG AAGTGCAGGC ATTAGCTGAT 
GTCACGCACG ATGCGCGCGA TATTTCCGCC AGCATCTCTT CCGGTTCTTT CCAGACGCTG 
GGGATGGTGA TTTTACCCTG TTCAATCAAA ACCCTTTCCG GCATTGTCCA TAGCTATACT 
GATGGCTTAC TGACCCGTGC GGCAGATGTG GTGCTGAAAG AGCGTCGCCC GTTGGTGCTC 
TGCGTGCGTG AAACACCATT GCACTTAGGC CATCTGCGTT TAATGACTCA GGCGGCAGAA 
ATCGGTGCGG TGATTATGCC TCCTGTTCCG GCGTTTTATC ATCGCCCGCA ATCCCTTGAT 
GATGTGATAA ATCAGACGGT TAATCGTGTT CTTGACCAGT TTGCAATAAC CCTTCCTGAA 
GATCTCTTTG CCCGCTGGCA GGGCGCATAA 

 

Protein sequence

MKRLIVGISG ASGAIYGVRL LQVLRDVTDI ETHLVMSQAA RQTLSLETDF SLREVQALAD 
VTHDARDISA SISSGSFQTL GMVILPCSIK TLSGIVHSYT DGLLTRAADV VLKERRPLVL 
CVRETPLHLG HLRLMTQAAE IGAVIMPPVP AFYHRPQSLD DVINQTVNRV LDQFAITLPE 
DLFARWQGA