| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2687 |
|---|
| Symbol | hisJ |
|---|
| ID | 6272308 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | - |
|---|
| Start bp | 2487335 |
|---|
| End bp | 2488117 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641726651 |
|---|
| Product | histidine ABC transporter, periplasmic histidine-binding protein |
|---|
| Protein accession | YP_001881131 |
|---|
| Protein GI | 187731129 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 0.859955 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAC TGGTGCTATC GCTCTCTCTG GTTCTGGCCT TCTCCAGCGC AACTGCGGCA
TTTGCTGCGA TTCCGCAAAA CATCCGCATC GGTACCGACC CGACCTATGC GCCATTTGAA
TCAAAAAATT CACAAGGCGA ACTGGTTGGC TTCGATATCG ATCTGGCAAA GGAATTATGC
AAACGCATCA ATACGCAATG TACGTTTGTC GAAAATCCGC TGGATGCGTT AATCCCGTCC
TTAAAAGCGA AGAAGATTGA CGCCATCATG TCATCGCTTT CCATTACGGA AAAACGTCAG
CAAGAAATAG CCTTCACCGA CAAACTGTAC GCTGCCGATT CTCGTTTGGT GGTGGCGAAA
AATTCTGACA TTCAGCCGAC AGTCGAGTCG CTGAAAGGCA AACGGGTAGG CGTATTGCAG
GGCACCACCC AGGAGACGTT CGGTAATGAA CATTGGGCAC CAAAAGGCAT TGAAATCGTC
TCGTATCAGG GGCAGGACAA CATTTATTCT GACCTGACTG CCGGACGTAT TGATGCCGCG
TTCCAGGATG AGGTCGCTGC CAGCGAAGGT TTCCTCAAAC AACCTGTCGG TAAAGATTAC
AAATTCGGTG GCCCGTCTGT TAAAGATGAA AAACTGTTTG GCGTAGGGAC CGGCATGGGC
CTGCGTAAAG AAGATAACGA ACTGCGCGAA GCACTGAACA AAGCCTTTGC CGAAATGCGC
GCTGACGGTA CTTACGAGAA ATTAGCGAAA AAGTACTTCG ATTTTGATGT TTATGGTGGC
TAA
|
|---|
| Protein sequence | MKKLVLSLSL VLAFSSATAA FAAIPQNIRI GTDPTYAPFE SKNSQGELVG FDIDLAKELC
KRINTQCTFV ENPLDALIPS LKAKKIDAIM SSLSITEKRQ QEIAFTDKLY AADSRLVVAK
NSDIQPTVES LKGKRVGVLQ GTTQETFGNE HWAPKGIEIV SYQGQDNIYS DLTAGRIDAA
FQDEVAASEG FLKQPVGKDY KFGGPSVKDE KLFGVGTGMG LRKEDNELRE ALNKAFAEMR
ADGTYEKLAK KYFDFDVYGG
|
|---|
| |