| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2668 |
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| Symbol | |
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| ID | 6273186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | - |
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| Start bp | 2470072 |
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| End bp | 2471904 |
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| Gene Length | 1833 bp |
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| Protein Length | 610 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641726633 |
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| Product | TRAP transporter, DctM-like membrane protein |
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| Protein accession | YP_001881113 |
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| Protein GI | 187731815 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.238092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACGGTG AATTGATTTG GGTTCTTTCA TTACTGGCCG TTGCCATCGT CTTGTTTGCG
ACGGGCAGAG TGCGTATGGA TGCGGTCGCT TTGTTTGTTA TTGTCGCGTT TGCATTAAGC
GGAACGCTGA CGGTCCCCGA AGTATTTTCC GGCTTTTCTG ATCCTAACGT TGTCCTGATT
GCCGCCTTGT TTATTATTGG CGATGGTTTG GTCCGTACCG GTGTTGCCAC CGTAATGGGA
ACATGGCTGG TCAAAGTGGC GGGCAACAGT GAAATCAAAA TGTTGGTTTT GTTGATGCTG
ACCGTCGCGG GGCTTGGCGC GTTTATGAGT TCAACCGGCG TTGTCGCTAT CTTTATTCCC
GTGGTGTTAA GCGTTGCCAT GCGTATGCAA ACTTCGCCGT CACGTCTGAT GATGCCGTTA
AGTTTTGCCG GGCTGATTAG CGGCATGATG ACGCTGGTGG CGACGCCGCC GAACCTGGTA
GTCAACAGTG AATTGCTGCG TGAAGGCTAT CACGGCTTCA GTTTCTTTAG CGTAACACCT
GTTGGCCTGG TCGTGCTGGT GCTGGGTATT TTGTATATGT TAGTGATGCG TTTCATGCTG
AAAGGGGATA CCCAGACCCC GCAGCGCGAA GGCTGGACGC GTCGAACCTT TCGCGATCTT
ATCCGTGAAT ATCGACTGAC CGGGCGTGCG CGACGTCTGG CTATTCGCCC CGGATCGGCA
ATGATTGGTC AACGGCTGGA TGATCTCAAA TTACGTGAGC GTTATGGCGC TAACGTCATC
GGTGTTGAAC GCTGGCGGCG TTTTCGTCGC GTTATCGTGA ACGTTAATGG GGTTTCTGAG
TTTCGCGCGC GTGACGTTTT GCTTATTGAT ATGTCTGCGG CTGATGTCGA TCTCCGGCAA
TTTTGTAGTG AGCAATTGCT GGAGCCGATG GTACTGCGCG GCGAGTATTT TTCTGACCAG
GCCCTTGATG TGGGCATGGC AGAGATTTCA TTAATTCCTG AGTCAGAACT GATTGGTAAA
TCGGTGCGCG AAATTGGTTT TCGTACCCGC TACGGACTGA ATGTGGTGGG GCTAAAGCGC
AATGGCGTGG CGCTGGAAGG TTCGCTGGCG GATGAGCCTC TGCTGCTGGG CGATATCATC
CTGGTTGTGG GTAACTGGAA ACTGATCGGT ATGCTGGCCA AACAGGGCCG CGACTTCGTA
GCGCTGAACT TACCGGAAGA GGTGAGTGAA GCATCGCCCG CGCACAGCCA GGCACCCCAT
GCCATTTTCT GTCTGGTGCT AATGGTGGCG TTAATGCTGA CAGATGAAAT TCCTAATCCT
GTTGCCGCTA TCATCGCCTG CCTGCTGATG GGGAAATTCC GCTGTATAGA TGCTGAAAGC
GCCTATAAAT CCATTCACTG GCCGAGCATT ATTTTGATCG TTGGGATGAT GCCGTTTGCT
GTGGCATTAC AGAAAACGGG AGGTGTCGCG CTGGCGGTGA AAGGGCTGAT GGACATTGGC
GGTGGTTACG GGCCACATAT GATGCTGGGG TGTTTGTTTG TCTTGTCGGC GGTTATTGGG
CTATTTATCT CTAATACCGC GACGGCGGTG TTGATGGCTC CGATTGCGCT GGCTGCTGCC
AAAACGATGG GGGTGTCGCC TTATCCATTC GCGATGGTCG TGGCGATGGC AGCATCCGCC
GCCTTTATGA CACCGGTTTC TTCACCTGTT AACACACTGG TTTTAGGTCC GGGAAATTAC
AGCTTCAGTG ACTTTGTGAA GTTGGGGGTA CCGTTCACCA TTATCGTGAT GGCGGTTTGT
GTGGTGATGA TCCCGATGCT GTTTCCGTTT TGA
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| Protein sequence | MNGELIWVLS LLAVAIVLFA TGRVRMDAVA LFVIVAFALS GTLTVPEVFS GFSDPNVVLI
AALFIIGDGL VRTGVATVMG TWLVKVAGNS EIKMLVLLML TVAGLGAFMS STGVVAIFIP
VVLSVAMRMQ TSPSRLMMPL SFAGLISGMM TLVATPPNLV VNSELLREGY HGFSFFSVTP
VGLVVLVLGI LYMLVMRFML KGDTQTPQRE GWTRRTFRDL IREYRLTGRA RRLAIRPGSA
MIGQRLDDLK LRERYGANVI GVERWRRFRR VIVNVNGVSE FRARDVLLID MSAADVDLRQ
FCSEQLLEPM VLRGEYFSDQ ALDVGMAEIS LIPESELIGK SVREIGFRTR YGLNVVGLKR
NGVALEGSLA DEPLLLGDII LVVGNWKLIG MLAKQGRDFV ALNLPEEVSE ASPAHSQAPH
AIFCLVLMVA LMLTDEIPNP VAAIIACLLM GKFRCIDAES AYKSIHWPSI ILIVGMMPFA
VALQKTGGVA LAVKGLMDIG GGYGPHMMLG CLFVLSAVIG LFISNTATAV LMAPIALAAA
KTMGVSPYPF AMVVAMAASA AFMTPVSSPV NTLVLGPGNY SFSDFVKLGV PFTIIVMAVC
VVMIPMLFPF
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