| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E2647 |
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| Symbol | rnz |
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| ID | 6272476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010658 |
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| Strand | + |
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| Start bp | 2446700 |
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| End bp | 2447617 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641726614 |
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| Product | ribonuclease Z |
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| Protein accession | YP_001881094 |
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| Protein GI | 187732862 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
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| TIGRFAM ID | [TIGR02649] ribonuclease BN
[TIGR02651] ribonuclease Z |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.313305 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAATTAA TTTTTTTAGG TACTTCAGCC GGTGTGCCAA CCCGCACGCG CAATGTCACG
GCAATATTGC TTAACCTGCA ACATCCGACC CAGAGCGGAC TTTGGTTGTT TGACTGCGGT
GAAGGCACCC AGCATCAGCT ACTGCATACC GCCTTTAACC CTGGAAAACT GGACAAGATT
TTTATCAGTC ACCTTCATGG CGATCATCTT TTTGGTTTAC CCGGCTTGCT GTGCAGTCGT
TCTATGTCAG GCATTATCCA ACCCTTAACG ATTTATGGTC CGCAAGGTAT CCGTGAATTT
GTGGAAACCG CGCTGCGGAT TAGCGGCTCA TGGACCGATT ATCCGCTGGA AATTGTCGAA
ATTGGCGCTG GCGAAATTCT CGATGATGGC CTGCGCAAAG TAACCGCTTA TCCGCTGGAA
CACCCACTGG AATGTTATGG CTATCGTATT GAAGAACATG ATAAACCGGG TGCATTAAAT
GCCCAGGCAT TAAAAGCTGC TGGCGTGCCG CCTGGCCCAC TGTTTCAGGA ATTAAAAGCG
GGCAAAACAA TCATGCTGGA AGATGGAAGG CAGATTAACG GCGCAGATTA CTTAGCTGCT
CCAGTGCCAG GTAAAGCGCT CGCTATTTTC GGCGATACCG GCCCCTGCGA TGCCGCACTT
GACCTGGCTA AAGGTGTCGA TGTCATGGTG CACGAAGCGA CGCTGGATAT AACCATGGAA
GCCAAAGCCA ATAGTCGCGG CCATAGCTCT ACACGCCAGG CTGCGACACT AGCCCGTGAG
GCTGGAGTCG GTAAGCTAAT CATTACCCAC GTCAGCTCGC GCTATGATGA CAAAGGTTGT
CAGCACCTGT TACGTGAATG CAGGTCAATT TTCCCGGCGA CTGAACTAGC GAATGATTTC
ACCGTGTTTA ACGTTTAA
|
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| Protein sequence | MELIFLGTSA GVPTRTRNVT AILLNLQHPT QSGLWLFDCG EGTQHQLLHT AFNPGKLDKI
FISHLHGDHL FGLPGLLCSR SMSGIIQPLT IYGPQGIREF VETALRISGS WTDYPLEIVE
IGAGEILDDG LRKVTAYPLE HPLECYGYRI EEHDKPGALN AQALKAAGVP PGPLFQELKA
GKTIMLEDGR QINGADYLAA PVPGKALAIF GDTGPCDAAL DLAKGVDVMV HEATLDITME
AKANSRGHSS TRQAATLARE AGVGKLIITH VSSRYDDKGC QHLLRECRSI FPATELANDF
TVFNV
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