Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_E2561 |
Symbol | |
ID | 6272411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010658 |
Strand | + |
Start bp | 2363480 |
End bp | 2364586 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641726542 |
Product | ABC-2 type transporter, permease protein |
Protein accession | YP_001881022 |
Protein GI | 187733234 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTCATC GCTTATGGAC GTTAATCCGC AAAGAGTTGC AGTCGCTGCT GCGCGAACCG CAAACCCGCG CGATTCTGAT TTTACCTGTG CTTATTCAGG TGATTCTGTT CCCGTTCGCC GCCACGCTGG AAGTGACTAA CGCCACCATC GCCATCTACG ATGAAGATAA CGGCGAGCAT TCGGTGGAGC TGACCCAACG TTTTGCCCGC GCCAGCGCCT TTACTCATGT GCTGCTGCTG AAAAGCCCAC AGGAGATCCG CCCAACCATC GACACACAAA AGGCGTTACT CCTGGTGCGT TTCCCGGCTG ACTTCTCGCG CAAACTGGAT ACCTTCCAGA CCGCGCCGTT GCAGTTGATC CTCGACGGGC GTAACTCCAA CAGTGCGCAA ATTGCCGCCA ACTACCTGCA ACAGATCGTC AAAAATTATC AGCAGGAGCT GCTGGAAGGA AAACCGAAAC CTAACAACAG CGAGCTGGTG GTACGCAACT GGTATAACCC GAATCTCGAC TACAAATGGT TTGTGGTGCC GTCACTGATC GCCATGATCA CCACTATCGG CGTAATGATC GTCACTTCAC TTTCCGTCGC CCGCGAACGT GAACAAGGTA CGCTCGATCA GCTACTGGTT TCGCCGCTCA CCACCTGGCA GATCTTCATC GGCAAAGCCG TACCGGCGTT AATTGTCGCC ACCTTCCAGG CCACCATTGT GCTGGCGATT GGTATCTGGG CGTATCAAAT CCCCTTCGCC GGATCGCTGG CGCTGTTCTA CTTTACGATG GTGATTTACG GTTTATCGCT GGTGGGATTC GGTCTGTTGA TTTCATCACT CTGCTCGACA CAACAGCAGG CGTTTATCGG CGTGTTTGTC TTTATGATGC CCGCCATTCT CCTTTCCGGT TACGTTTCGC CGGTGGAAAA CATGCCAGTA TGGCTGCAAA ACCTGACGTG GATTAACCCT ATTCGCCACT TTACGGACAT TACCAAGCAG ATTTATTTGA AGGATGCGAG TCTGGATATT GTGTGGAATA GTTTGTGGCC GCTACTGGTG ATAACGGCCA CGACAGGGTC AGCGGCGTAC GCGATGTTTA GACGTAAGGT GATGTAA
|
Protein sequence | MFHRLWTLIR KELQSLLREP QTRAILILPV LIQVILFPFA ATLEVTNATI AIYDEDNGEH SVELTQRFAR ASAFTHVLLL KSPQEIRPTI DTQKALLLVR FPADFSRKLD TFQTAPLQLI LDGRNSNSAQ IAANYLQQIV KNYQQELLEG KPKPNNSELV VRNWYNPNLD YKWFVVPSLI AMITTIGVMI VTSLSVARER EQGTLDQLLV SPLTTWQIFI GKAVPALIVA TFQATIVLAI GIWAYQIPFA GSLALFYFTM VIYGLSLVGF GLLISSLCST QQQAFIGVFV FMMPAILLSG YVSPVENMPV WLQNLTWINP IRHFTDITKQ IYLKDASLDI VWNSLWPLLV ITATTGSAAY AMFRRKVM
|
| |